| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23173 | 4:20,134,233-20,137,730 | + | C2H4g15046 | CX4g031560 | LOC_Os04g38870 | Os04g0462500 | - | Detail |
| C1H4g05269 | 4:20,138,431-20,140,481 | - | C2H4g09025 | CX4g033001 | LOC_Os04g38880 | Os04g0462600 | - | Detail |
| C1H4g30627 | 4:20,146,849-20,147,703 | - | C2H4g27908 | CX4g034025 | LOC_Os04g38900 | Os04g0462900 | - | Detail |
| C1H4g28569 | 4:20,149,829-20,152,398 | - | C2H4g10984 | CX4g032418 | LOC_Os04g38910 | Os04g0463000 | - | Detail |
| C1H4g14030 | 4:20,158,006-20,158,918 | - | - | - | - | - | - | Detail |
| C1H4g28377 | 4:20,163,434-20,164,307 | - | C2H4g23255 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g31445 | 4:20,165,453-20,165,896 | - | C2H4g07912 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g09561 | 4:20,169,229-20,172,624 | - | C2H4g28763 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C1H4g11967 | 4:20,174,541-20,177,039 | + | C2H4g28177 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C1H4g05080 | 4:20,179,690-20,181,500 | - | C2H4g13162 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C1H4g02516 | 4:20,181,910-20,188,388 | - | C2H4g07932 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C1H4g21091 | 4:20,199,235-20,199,681 | - | - | - | - | - | - | Detail |
| C1H4g01794 | 4:20,200,816-20,205,566 | - | C2H4g13985 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C1H4g07451 | 4:20,208,347-20,212,309 | - | C2H4g00984 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C1H4g23214 | 4:20,215,020-20,219,987 | + | C2H4g04170 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C1H4g17346 | 4:20,223,164-20,223,448 | - | C2H4g17707 | - | - | - | - | Detail |
| C1H4g20578 | 4:20,230,246-20,230,536 | - | C2H4g26653 | CX4g036034 | - | - | - | Detail |
| C1H4g22118 | 4:20,242,943-20,249,032 | - | C2H4g00542 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C1H4g16307 | 4:20,253,424-20,254,077 | - | C2H4g07256 | - | - | Os07g0567801 | - | Detail |
| C1H4g10402 | 4:20,258,867-20,259,130 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g04976 | 5:20,737,275-20,738,300 | - | C1H5g01590 | CX5g037904 | LOC_Os05g42100 | Os05g0500400 | - | Detail |
| C2H5g17368 | 5:20,740,815-20,741,114 | - | C1H5g23905 | CX5g039175 | LOC_Os05g42110 | Os05g0500450 | - | Detail |
| C2H5g28908 | 5:20,741,605-20,743,018 | + | C1H5g08894 | CX5g040012 | LOC_Os05g42120 | Os05g0500500 | - | Detail |
| C2H5g15260 | 5:20,745,353-20,746,615 | + | C1H5g00178 | CX5g040288 | LOC_Os05g42130 | Os05g0500600 | - | Detail |
| C2H5g27415 | 5:20,747,139-20,747,840 | + | C1H5g22483 | CX5g039601 | LOC_Os05g42140 | Os05g0500700 | - | Detail |
| C2H5g14428 | 5:20,761,152-20,763,519 | - | C1H5g12028 | CX5g037712 | LOC_Os05g42150 | Os05g0500900 | GH3.4 | Detail |
| C2H5g30517 | 5:20,778,520-20,778,753 | + | C1H5g02940 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g05470 | 5:20,778,849-20,779,217 | + | C1H5g11642 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g20931 | 5:20,779,285-20,779,712 | + | C1H5g20540 | CX5g040758 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g14062 | 5:20,784,465-20,787,937 | - | C1H5g28555 | CX5g037320 | LOC_Os05g42190 | Os05g0501300 | - | Detail |
| C2H5g07451 | 5:20,789,735-20,795,475 | + | C1H5g24557 | CX5g040051 | LOC_Os05g42210 | Os05g0501400 | SDRLK-4 | Detail |
| C2H5g07655 | 5:20,799,494-20,802,527 | + | C1H5g06747 | CX5g041088 | LOC_Os05g42220 | Os05g0501600 | - | Detail |
| C2H5g05999 | 5:20,803,642-20,806,401 | + | C1H5g31272 | CX5g040415 | LOC_Os05g42230 | Os05g0501700 | - | Detail |
| C2H5g01142 | 5:20,809,394-20,810,657 | - | C1H5g16795 | CX5g039962 | LOC_Os05g42240 | Os05g0501800 | OsSPL | Detail |
| C2H5g13735 | 5:20,817,548-20,822,179 | + | C1H5g26421 | CX5g038769 | LOC_Os05g42250 | Os05g0502000 | OsCNGC16 | Detail |
| C2H5g18831 | 5:20,828,183-20,830,990 | + | C1H5g17054 | CX5g040519 | LOC_Os05g42270 | Os05g0502200 | - | Detail |
| C2H5g21255 | 5:20,833,484-20,837,130 | - | C1H5g06217 | CX5g040478 | LOC_Os05g42280 | Os05g0502500 | - | Detail |
| C2H5g19742 | 5:20,839,401-20,840,950 | + | C1H5g22762 | CX5g037515 | LOC_Os05g42290 | Os05g0502700 | - | Detail |
| C2H5g01889 | 5:20,843,911-20,847,454 | - | C1H5g20863 | CX5g039451 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| C2H5g24320 | 5:20,850,709-20,851,170 | + | C1H5g12553 | CX5g038016 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |