| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09842 | 4:19,965,873-19,967,760 | + | C2H4g10950 | CX4g031630 | LOC_Os04g38600 | Os04g0459500 | - | Detail |
| C1H4g22419 | 4:19,968,451-19,970,778 | - | C2H4g21093 | CX4g035534 | LOC_Os04g38610 | Os04g0459600 | - | Detail |
| C1H4g02624 | 4:19,972,528-19,975,843 | - | C2H4g29769 | CX4g031435 | LOC_Os04g38620 | Os04g0459700 | - | Detail |
| C1H4g06613 | 4:19,981,869-19,985,349 | - | C2H4g23801 | CX4g032546 | LOC_Os04g38630 | Os04g0459800 | - | Detail |
| C1H4g08376 | 4:19,988,929-19,994,340 | + | C2H4g04441 | CX4g034165 | LOC_Os04g38640 | Os04g0459900 | - | Detail |
| C1H4g19139 | 4:20,001,646-20,003,575 | + | C2H4g25768 | CX4g035386 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| C1H4g00598 | 4:20,019,678-20,021,871 | + | C2H4g01029 | CX4g036106 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| C1H4g20972 | 4:20,026,350-20,027,141 | + | C2H4g15731 | CX4g033651 | LOC_Os04g38690 | Os04g0460400 | CASP5, OsCASP5 | Detail |
| C1H4g26714 | 4:20,029,626-20,032,112 | + | C2H4g29420 | CX4g035215 | LOC_Os04g38700 | Os04g0460500 | - | Detail |
| C1H4g00856 | 4:20,038,253-20,039,873 | + | C2H4g09182 | CX4g035794 | LOC_Os04g38720 | Os04g0460600 | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2 | Detail |
| C1H4g10275 | 4:20,046,098-20,049,027 | - | C2H4g21139 | CX4g031747 | LOC_Os04g38730 | - | - | Detail |
| C1H4g16192 | 4:20,070,094-20,073,348 | + | C2H4g04335 | CX4g033056 | LOC_Os04g38740 | Os04g0461000 | Os2R_MYB43 | Detail |
| C1H4g01178 | 4:20,073,898-20,075,514 | + | C2H4g17531 | CX4g035604 | LOC_Os04g38750 | Os04g0461100 | - | Detail |
| C1H4g10260 | 4:20,086,206-20,094,834 | + | C2H4g02198 | CX4g035338 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| C1H4g16630 | 4:20,087,292-20,103,395 | - | C2H4g30121 | - | - | - | - | Detail |
| C1H4g09833 | 4:20,107,659-20,108,803 | - | C2H4g15152 | CX4g032154 | - | Os04g0461600 | - | Detail |
| C1H4g11139 | 4:20,114,503-20,117,717 | - | C2H4g04073 | CX4g033096 | LOC_Os04g38810 | Os04g0461800 | - | Detail |
| C1H4g20046 | 4:20,119,778-20,126,787 | - | C2H4g14143 | CX4g035671 | LOC_Os04g38850 | Os04g0462300 | - | Detail |
| C1H4g28167 | 4:20,124,184-20,124,561 | + | C2H4g25655 | CX4g034495 | LOC_Os04g38840 | Os04g0462200 | - | Detail |
| C1H4g07343 | 4:20,127,971-20,130,002 | - | C2H4g21045 | CX4g031760 | LOC_Os04g38860 | Os04g0462400 | OsLHT4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08580 | 2:32,108,862-32,110,768 | - | C1H2g10535 | CX2g021814 | LOC_Os02g57560 | Os02g0821400 | - | Detail |
| C2H2g16309 | 2:32,113,079-32,115,196 | + | C1H2g24451 | CX2g021049 | LOC_Os02g57570 | Os02g0821600 | - | Detail |
| C2H2g24112 | 2:32,117,735-32,120,614 | + | C1H2g12685 | CX2g021135 | LOC_Os02g57590 | Os02g0821800 | - | Detail |
| C2H2g23576 | 2:32,122,546-32,124,479 | + | C1H2g04299 | CX2g023799 | LOC_Os02g57600 | Os02g0821900 | - | Detail |
| C2H2g14935 | 2:32,127,056-32,131,215 | + | C1H2g02977 | CX2g023493 | LOC_Os02g57610 | Os02g0822000 | - | Detail |
| C2H2g30134 | 2:32,133,443-32,137,431 | + | C1H2g30345 | CX2g020357 | LOC_Os02g57620 | Os02g0822100 | - | Detail |
| C2H2g03095 | 2:32,138,613-32,141,575 | + | C1H2g25628 | CX2g019104 | LOC_Os02g57630 | Os02g0822200 | - | Detail |
| C2H2g18732 | 2:32,142,605-32,151,942 | + | C1H2g09063 | CX2g022757 | LOC_Os02g57640 | Os02g0822400 | - | Detail |
| C2H2g23770 | 2:32,152,088-32,158,167 | - | C1H2g16867 | CX2g023127 | LOC_Os02g57660 | Os02g0822500 | - | Detail |
| C2H2g22421 | 2:32,165,157-32,167,826 | - | C1H2g06317 | CX2g024897 | LOC_Os02g57670 | Os02g0822600 | - | Detail |
| C2H2g22113 | 2:32,170,514-32,176,775 | - | C1H2g08984 | CX2g022012 | LOC_Os02g57690 | Os02g0822800 | - | Detail |
| C2H2g05316 | 2:32,181,634-32,187,123 | + | C1H2g22600 | CX2g022723 | LOC_Os02g57700 | Os02g0822900 | - | Detail |
| C2H2g07565 | 2:32,188,395-32,193,879 | + | C1H2g03991 | CX2g023366 | LOC_Os02g57710 | Os02g0823000 | - | Detail |
| C2H2g14434 | 2:32,195,675-32,197,384 | + | C1H2g18559 | CX2g019966 | LOC_Os02g57720 | Os02g0823100 | OsPIP1;3 | Detail |
| C2H2g30480 | 2:32,201,722-32,203,108 | + | C1H2g23231 | CX2g023177 | LOC_Os02g57740 | Os02g0823200 | - | Detail |
| C2H2g28739 | 2:32,209,610-32,215,626 | + | C1H2g28675 | CX2g024739 | LOC_Os02g57750 | Os02g0823300 | - | Detail |
| C2H2g20143 | 2:32,217,321-32,223,807 | + | C1H2g07473 | CX2g021224 | LOC_Os02g57760 | Os02g0823400 | COMT2 | Detail |
| C2H2g30514 | 2:32,223,785-32,225,637 | - | C1H2g07620 | CX2g021746 | - | Os02g0823600 | - | Detail |
| C2H2g01115 | 2:32,226,357-32,228,484 | - | C1H2g27003 | CX2g020179 | LOC_Os02g57770 | Os02g0823700 | - | Detail |
| C2H2g11155 | 2:32,228,939-32,234,714 | + | C1H2g28434 | CX2g021167 | LOC_Os02g57780 | Os02g0823800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |