| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09842 | 4:19,965,873-19,967,760 | + | C2H4g10950 | CX4g031630 | LOC_Os04g38600 | Os04g0459500 | - | Detail |
| C1H4g22419 | 4:19,968,451-19,970,778 | - | C2H4g21093 | CX4g035534 | LOC_Os04g38610 | Os04g0459600 | - | Detail |
| C1H4g02624 | 4:19,972,528-19,975,843 | - | C2H4g29769 | CX4g031435 | LOC_Os04g38620 | Os04g0459700 | - | Detail |
| C1H4g06613 | 4:19,981,869-19,985,349 | - | C2H4g23801 | CX4g032546 | LOC_Os04g38630 | Os04g0459800 | - | Detail |
| C1H4g08376 | 4:19,988,929-19,994,340 | + | C2H4g04441 | CX4g034165 | LOC_Os04g38640 | Os04g0459900 | - | Detail |
| C1H4g19139 | 4:20,001,646-20,003,575 | + | C2H4g25768 | CX4g035386 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| C1H4g00598 | 4:20,019,678-20,021,871 | + | C2H4g01029 | CX4g036106 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| C1H4g20972 | 4:20,026,350-20,027,141 | + | C2H4g15731 | CX4g033651 | LOC_Os04g38690 | Os04g0460400 | CASP5, OsCASP5 | Detail |
| C1H4g26714 | 4:20,029,626-20,032,112 | + | C2H4g29420 | CX4g035215 | LOC_Os04g38700 | Os04g0460500 | - | Detail |
| C1H4g00856 | 4:20,038,253-20,039,873 | + | C2H4g09182 | CX4g035794 | LOC_Os04g38720 | Os04g0460600 | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2 | Detail |
| C1H4g10275 | 4:20,046,098-20,049,027 | - | C2H4g21139 | CX4g031747 | LOC_Os04g38730 | - | - | Detail |
| C1H4g16192 | 4:20,070,094-20,073,348 | + | C2H4g04335 | CX4g033056 | LOC_Os04g38740 | Os04g0461000 | Os2R_MYB43 | Detail |
| C1H4g01178 | 4:20,073,898-20,075,514 | + | C2H4g17531 | CX4g035604 | LOC_Os04g38750 | Os04g0461100 | - | Detail |
| C1H4g10260 | 4:20,086,206-20,094,834 | + | C2H4g02198 | CX4g035338 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| C1H4g16630 | 4:20,087,292-20,103,395 | - | C2H4g30121 | - | - | - | - | Detail |
| C1H4g09833 | 4:20,107,659-20,108,803 | - | C2H4g15152 | CX4g032154 | - | Os04g0461600 | - | Detail |
| C1H4g11139 | 4:20,114,503-20,117,717 | - | C2H4g04073 | CX4g033096 | LOC_Os04g38810 | Os04g0461800 | - | Detail |
| C1H4g20046 | 4:20,119,778-20,126,787 | - | C2H4g14143 | CX4g035671 | LOC_Os04g38850 | Os04g0462300 | - | Detail |
| C1H4g28167 | 4:20,124,184-20,124,561 | + | C2H4g25655 | CX4g034495 | LOC_Os04g38840 | Os04g0462200 | - | Detail |
| C1H4g07343 | 4:20,127,971-20,130,002 | - | C2H4g21045 | CX4g031760 | LOC_Os04g38860 | Os04g0462400 | OsLHT4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26314 | 1:6,202,428-6,205,007 | + | C1H1g06023 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C2H1g13868 | 1:6,205,888-6,211,291 | - | C1H1g23194 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C2H1g02547 | 1:6,214,425-6,220,207 | + | C1H1g24866 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C2H1g29977 | 1:6,225,235-6,227,704 | + | C1H1g15047 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C2H1g09030 | 1:6,254,290-6,255,477 | + | C1H1g31834 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C2H1g01170 | 1:6,269,853-6,278,743 | + | C1H1g16770 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C2H1g13949 | 1:6,288,929-6,293,725 | + | C1H1g17285 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| C2H1g18702 | 1:6,294,823-6,298,356 | + | C1H1g25457 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C2H1g07843 | 1:6,299,097-6,301,091 | + | C1H1g25274 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C2H1g27903 | 1:6,303,876-6,306,806 | + | C1H1g23728 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C2H1g03495 | 1:6,319,132-6,320,597 | + | C1H1g24596 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g07762 | 1:6,330,680-6,331,687 | + | C1H1g29841 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g29591 | 1:6,332,142-6,332,423 | + | C1H1g01201 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g07697 | 1:6,335,520-6,337,446 | + | C1H1g24596 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g26121 | 1:6,340,173-6,341,153 | + | C1H1g05848 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g22175 | 1:6,341,658-6,342,245 | + | C1H1g05848 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g18144 | 1:6,348,787-6,352,298 | + | C1H1g29762 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C2H1g23747 | 1:6,352,999-6,355,883 | - | C1H1g00126 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C2H1g03627 | 1:6,359,984-6,362,107 | + | C1H1g09783 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C2H1g17734 | 1:6,362,750-6,364,242 | - | C1H1g01893 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |