| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g01030 | 4:19,820,831-19,824,324 | - | C2H4g09229 | CX4g032194 | LOC_Os04g38310 | Os04g0455600 | - | Detail |
| C1H4g29223 | 4:19,826,507-19,827,172 | - | C2H4g18556 | CX4g035883 | LOC_Os04g38320 | Os04g0455700 | - | Detail |
| C1H4g03280 | 4:19,828,718-19,832,105 | - | C2H4g18168 | CX4g035295 | LOC_Os04g38330 | Os04g0455800 | - | Detail |
| C1H4g03811 | 4:19,833,009-19,838,490 | - | C2H4g00429 | CX4g034220 | LOC_Os04g38340 | Os04g0455900 | - | Detail |
| C1H4g01343 | 4:19,846,892-19,847,526 | + | C2H4g11871 | CX4g032706 | LOC_Os04g38360 | Os04g0456200 | - | Detail |
| C1H4g04728 | 4:19,854,600-19,855,212 | + | C2H4g06670 | CX4g031844 | LOC_Os04g38370 | Os04g0456300 | - | Detail |
| C1H4g10291 | 4:19,858,122-19,859,110 | + | C2H4g02501 | CX4g034632 | LOC_Os04g38390 | Os04g0456700 | - | Detail |
| C1H4g13915 | 4:19,862,839-19,864,245 | + | C2H4g09656 | CX4g033427 | LOC_Os04g38400 | Os04g0456900 | - | Detail |
| C1H4g02678 | 4:19,864,805-19,866,060 | - | C2H4g04651 | CX4g032431 | LOC_Os04g38410 | Os04g0457000 | - | Detail |
| C1H4g07783 | 4:19,866,991-19,868,734 | - | - | CX4g034532 | LOC_Os04g38420 | Os04g0457200 | - | Detail |
| C1H4g15165 | 4:19,869,131-19,871,882 | - | C2H4g10829 | CX4g034532 | LOC_Os04g38420 | Os04g0457200 | - | Detail |
| C1H4g06980 | 4:19,881,512-19,883,855 | + | C2H4g26358 | CX4g034762 | LOC_Os04g38430 | Os04g0422300 | - | Detail |
| C1H4g00981 | 4:19,888,574-19,893,419 | - | C2H4g10358 | CX4g033571 | LOC_Os04g38450 | Os04g0457500 | - | Detail |
| C1H4g26009 | 4:19,898,807-19,899,765 | + | C2H4g28109 | CX4g035584 | LOC_Os04g38470 | Os04g0457700 | - | Detail |
| C1H4g29579 | 4:19,900,402-19,905,843 | - | C2H4g10126 | CX4g035155 | LOC_Os04g38480 | Os04g0457800 | - | Detail |
| C1H4g23002 | 4:19,919,958-19,924,761 | + | C2H4g10164 | CX4g036175 | LOC_Os04g38520 | Os04g0458200 | - | Detail |
| C1H4g04715 | 4:19,926,718-19,931,495 | + | C2H4g00520 | CX4g036090 | LOC_Os04g38530 | Os04g0458300 | - | Detail |
| C1H4g12477 | 4:19,934,262-19,937,078 | + | C2H4g29750 | CX4g032972 | LOC_Os04g38540 | Os04g0458600 | - | Detail |
| C1H4g27879 | 4:19,940,324-19,941,996 | - | C2H4g03798 | CX4g034144 | LOC_Os04g38550 | Os04g0458800 | - | Detail |
| C1H4g06452 | 4:19,947,687-19,954,019 | - | C2H4g12838 | CX4g032809 | LOC_Os04g38570 | Os04g0459000 | MDR13, OsABCB14, OsPGP14, OsMDR13, OsABCB14_1, OsABCB14_2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07729 | 1:21,396,998-21,401,013 | - | C1H1g31873 | CX1g003269 | LOC_Os01g42070 | Os01g0605500 | - | Detail |
| C2H1g10885 | 1:21,403,202-21,408,020 | + | C1H1g20019 | CX1g006387 | LOC_Os01g42080 | Os01g0605650 | - | Detail |
| C2H1g20017 | 1:21,409,245-21,411,400 | + | C1H1g31095 | CX1g006487 | LOC_Os01g42090 | Os01g0605700 | - | Detail |
| C2H1g28445 | 1:21,420,210-21,422,287 | + | C1H1g31279 | CX1g005982 | LOC_Os01g42110 | Os01g0606000 | - | Detail |
| C2H1g04496 | 1:21,425,391-21,426,160 | + | C1H1g21555 | - | LOC_Os01g42120 | Os01g0606050 | - | Detail |
| C2H1g14040 | 1:21,433,313-21,433,737 | - | C1H1g22990 | CX1g005526 | LOC_Os01g42160 | Os01g0606200 | - | Detail |
| C2H1g02609 | 1:21,442,392-21,443,526 | + | C1H1g04716 | CX1g003079 | LOC_Os01g42190 | Os01g0606900 | - | Detail |
| C2H1g01517 | 1:21,445,897-21,446,484 | + | C1H1g16043 | CX1g001557 | LOC_Os01g42210 | Os01g0607100 | OsLTP47 | Detail |
| C2H1g10594 | 1:21,447,697-21,447,950 | + | - | - | - | - | - | Detail |
| C2H1g06379 | 1:21,460,076-21,469,105 | + | C1H1g20659 | CX1g006536 | LOC_Os01g42234 | Os01g0607200 | - | Detail |
| C2H1g15867 | 1:21,470,018-21,472,607 | + | C1H1g27828 | CX1g004927 | - | Os01g0607300 | - | Detail |
| C2H1g24915 | 1:21,474,256-21,485,813 | - | C1H1g05783 | CX1g005806 | LOC_Os01g42260 | Os01g0607400 | - | Detail |
| C2H1g17050 | 1:21,488,314-21,493,142 | - | C1H1g11523 | CX1g005339 | LOC_Os01g42270 | Os01g0607600 | - | Detail |
| C2H1g29382 | 1:21,505,464-21,507,302 | + | C1H1g12198 | CX1g006801 | LOC_Os01g42280 | Os01g0607800 | - | Detail |
| C2H1g11875 | 1:21,511,985-21,517,860 | - | C1H1g00531 | CX1g003638 | LOC_Os01g42294 | Os01g0607900 | - | Detail |
| C2H1g21798 | 1:21,540,554-21,541,432 | + | C1H1g31773 | CX1g004840 | LOC_Os01g42320 | Os01g0598600 | - | Detail |
| C2H1g08894 | 1:21,544,265-21,552,834 | - | C1H1g13748 | CX1g001820 | LOC_Os01g42350 | Os01g0609000 | - | Detail |
| C2H1g05503 | 1:21,560,144-21,568,265 | - | C1H1g27835 | CX1g001440 | LOC_Os01g42370 | Os01g0609200 | - | Detail |
| C2H1g10771 | 1:21,569,738-21,573,876 | - | C1H1g11573 | CX1g006062 | LOC_Os01g42380 | Os01g0609300 | - | Detail |
| C2H1g14232 | 1:21,593,459-21,594,475 | - | C1H1g18561 | CX1g006250 | LOC_Os01g42400 | Os01g0284300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |