| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03203 | 4:19,667,750-19,669,787 | - | C2H4g02103 | CX4g032253 | LOC_Os04g37790 | Os04g0450900 | - | Detail |
| C1H4g01696 | 4:19,672,943-19,679,881 | + | C2H4g27781 | CX4g033970 | LOC_Os04g37810 | Os04g0451100 | - | Detail |
| C1H4g14124 | 4:19,681,578-19,683,466 | + | C2H4g25963 | CX4g035607 | LOC_Os04g37820 | Os04g0451200 | - | Detail |
| C1H4g10319 | 4:19,696,877-19,697,143 | + | C2H4g17860 | CX4g033061 | LOC_Os04g37880 | Os04g0451700 | - | Detail |
| C1H4g31154 | 4:19,699,269-19,705,269 | - | C2H4g19666 | CX4g032224 | LOC_Os04g37904 | Os04g0452000 | - | Detail |
| C1H4g12907 | 4:19,719,247-19,724,360 | + | C2H4g00200 | CX4g035297 | LOC_Os04g37920 | Os04g0452100 | OsCRY1b, CRY1b, CRY1 | Detail |
| C1H4g24033 | 4:19,724,660-19,728,201 | - | C2H4g29057 | CX4g036657 | LOC_Os04g37940 | Os04g0452300 | - | Detail |
| C1H4g29737 | 4:19,729,372-19,736,044 | - | C2H4g08692 | CX4g032560 | LOC_Os04g37950 | Os04g0452400 | - | Detail |
| C1H4g02254 | 4:19,739,617-19,747,547 | + | C2H4g06634 | CX4g035909 | LOC_Os04g37960 | Os04g0452500 | ZEP1 | Detail |
| C1H4g22749 | 4:19,751,174-19,752,895 | + | C2H4g14229 | CX4g033774 | LOC_Os04g37970 | Os04g0452600 | OsSTP14 | Detail |
| C1H4g14272 | 4:19,757,813-19,758,169 | + | C2H4g08272 | CX4g036561 | LOC_Os04g37980 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| C1H4g27712 | 4:19,758,908-19,760,211 | + | C2H4g05982 | CX4g036561 | LOC_Os04g37980 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| C1H4g28786 | 4:19,760,830-19,761,510 | + | C2H4g04570 | CX4g036561 | LOC_Os04g37980 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| C1H4g28777 | 4:19,764,268-19,769,632 | + | C2H4g06218 | CX4g034947 | LOC_Os04g37990 | Os04g0453200 | OsSTP15 | Detail |
| C1H4g15796 | 4:19,772,406-19,776,637 | + | C2H4g29252 | CX4g034372 | LOC_Os04g38010 | Os04g0453300 | OsSTP16 | Detail |
| C1H4g03364 | 4:19,776,720-19,781,840 | - | C2H4g22075 | CX4g033922 | LOC_Os04g38026 | Os04g0454200 | OsSTP18 | Detail |
| C1H4g25156 | 4:19,790,371-19,793,539 | - | C2H4g01990 | CX4g033922 | LOC_Os04g38026 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| C1H4g04258 | 4:19,797,908-19,801,818 | + | C2H4g09683 | CX4g033029 | LOC_Os04g38220 | Os04g0454200 | OsSTP18 | Detail |
| C1H4g20229 | 4:19,803,078-19,805,394 | + | C2H4g14087 | CX4g036291 | LOC_Os04g38300 | Os04g0380500 | - | Detail |
| C1H4g07088 | 4:19,805,739-19,811,520 | - | C2H4g29729 | CX4g036657 | LOC_Os04g38290 | Os04g0455401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19411 | 5:20,483,239-20,484,174 | - | C1H5g22952 | CX5g039595 | LOC_Os05g41490 | Os05g0494600 | - | Detail |
| C2H5g09380 | 5:20,492,340-20,492,855 | + | C1H5g26938 | CX5g037664 | LOC_Os05g41500 | Os05g0494700 | - | Detail |
| C2H5g03995 | 5:20,495,130-20,503,626 | + | C1H5g06464 | CX5g039650 | LOC_Os05g41510 | Os05g0494800 | - | Detail |
| C2H5g23505 | 5:20,503,683-20,504,588 | - | C1H5g10924 | CX5g040632 | LOC_Os05g41520 | Os05g0495000 | - | Detail |
| C2H5g03977 | 5:20,507,614-20,511,277 | + | C1H5g24212 | CX5g040499 | LOC_Os05g41530 | Os05g0495100 | - | Detail |
| C2H5g23523 | 5:20,516,562-20,517,236 | - | C1H5g12882 | CX5g041013 | LOC_Os05g41540 | Os05g0495200 | - | Detail |
| C2H5g25673 | 5:20,530,412-20,536,648 | + | C1H5g06979 | CX5g039272 | LOC_Os05g41580 | Os05g0495600 | - | Detail |
| C2H5g22048 | 5:20,539,728-20,542,574 | + | C1H5g15624 | CX5g038287 | LOC_Os05g41590 | Os05g0495700 | - | Detail |
| C2H5g23221 | 5:20,550,045-20,553,607 | + | C1H5g21401 | CX5g040024 | LOC_Os05g41610 | Os05g0495900 | - | Detail |
| C2H5g16652 | 5:20,555,138-20,555,530 | + | C1H5g08153 | CX5g040938 | LOC_Os05g41620 | Os05g0496000 | - | Detail |
| C2H5g16282 | 5:20,556,051-20,556,953 | - | C1H5g29278 | CX5g038168 | LOC_Os05g41630 | Os05g0496100 | - | Detail |
| C2H5g29840 | 5:20,557,967-20,560,423 | - | C1H5g10706 | CX5g039229 | LOC_Os05g41640 | Os05g0496200 | - | Detail |
| C2H5g26906 | 5:20,562,120-20,563,465 | - | C1H5g02490 | CX5g038553 | LOC_Os05g41660 | Os05g0496400 | OsMC4 | Detail |
| C2H5g01565 | 5:20,563,909-20,566,436 | - | C1H5g27054 | CX5g038025 | LOC_Os05g41670 | Os05g0496500 | OsMC5 | Detail |
| C2H5g01213 | 5:20,573,211-20,582,736 | + | C1H5g24401 | CX5g038896 | LOC_Os05g41750 | Os05g0497150 | - | Detail |
| C2H5g03586 | 5:20,584,676-20,585,257 | - | C1H5g15275 | CX5g037356 | LOC_Os05g41760 | Os05g0497200 | ERF130, MFS1, OsERF#130, OsERF130, AP2/EREBP#165, AP2/EREBP165 | Detail |
| C2H5g06109 | 5:20,590,213-20,590,725 | - | C1H5g19097 | - | - | - | - | Detail |
| C2H5g13982 | 5:20,590,726-20,591,217 | - | C1H5g27872 | - | - | - | - | Detail |
| C2H5g05481 | 5:20,597,606-20,598,316 | - | C1H5g20790 | CX5g039606 | LOC_Os05g41780 | Os05g0497300 | OsERF74 | Detail |
| C2H5g00564 | 5:20,618,620-20,623,514 | - | C1H5g01822 | CX5g039317 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |