| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00345 | 4:19,276,623-19,281,726 | - | C2H4g08466 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g13740 | 4:19,287,095-19,289,818 | - | C2H4g24398 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g18207 | 4:19,291,251-19,293,953 | - | C2H4g24197 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g12484 | 4:19,295,444-19,296,334 | - | C2H4g10027 | CX4g036322 | LOC_Os02g35315 | Os04g0443801 | - | Detail |
| C1H4g12445 | 4:19,297,770-19,299,633 | - | C2H4g18187 | CX4g032651 | LOC_Os04g43560 | Os04g0536500 | - | Detail |
| C1H4g10795 | 4:19,305,209-19,309,530 | - | C2H4g06964 | CX4g035373 | LOC_Os04g46620 | Os04g0443900 | - | Detail |
| C1H4g01511 | 4:19,333,335-19,339,051 | + | C2H4g00367 | CX4g031398 | LOC_Os04g36660 | Os04g0444200 | - | Detail |
| C1H4g01464 | 4:19,355,451-19,359,891 | - | C2H4g21834 | CX4g032495 | LOC_Os04g36680 | Os04g0444400 | - | Detail |
| C1H4g10961 | 4:19,362,916-19,365,578 | + | C2H4g14271 | CX4g035262 | LOC_Os04g36700 | Os04g0444600 | - | Detail |
| C1H4g02574 | 4:19,377,161-19,382,996 | + | C2H4g22232 | CX4g032233 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| C1H4g19141 | 4:19,390,715-19,395,017 | + | C2H4g01316 | CX4g035751 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| C1H4g01276 | 4:19,396,405-19,398,702 | + | C2H4g08818 | CX4g033534 | LOC_Os04g36730 | Os04g0444900 | - | Detail |
| C1H4g22503 | 4:19,399,294-19,401,775 | - | C2H4g11016 | CX4g035720 | LOC_Os04g36740 | Os04g0445000 | OsSKOR | Detail |
| C1H4g28185 | 4:19,403,558-19,403,938 | - | C2H4g13134 | CX4g033595 | LOC_Os04g36740 | - | - | Detail |
| C1H4g28351 | 4:19,403,947-19,404,846 | - | C2H4g21365 | CX4g033595 | LOC_Os04g36740 | - | - | Detail |
| C1H4g21010 | 4:19,414,524-19,415,060 | - | C2H4g28013 | CX4g031649 | LOC_Os04g36760 | Os04g0445200 | - | Detail |
| C1H4g28209 | 4:19,417,756-19,420,419 | + | C2H4g12496 | CX4g036200 | LOC_Os04g36780 | Os04g0445400 | - | Detail |
| C1H4g17080 | 4:19,426,486-19,430,258 | - | C2H4g16998 | CX4g036306 | LOC_Os04g36800 | Os04g0445700 | - | Detail |
| C1H4g30441 | 4:19,433,116-19,436,436 | + | C2H4g01997 | CX4g033224 | LOC_Os04g36810 | Os04g0445800 | - | Detail |
| C1H4g30426 | 4:19,438,296-19,438,727 | - | C2H4g17382 | - | LOC_Os04g36820 | Os04g0445900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06471 | 1:38,256,733-38,261,732 | - | C1H1g31840 | CX1g001384 | - | - | - | Detail |
| C2H1g27116 | 1:38,263,067-38,266,738 | + | C1H1g26867 | CX1g001353 | LOC_Os01g74640 | Os01g0978000 | OsUCP1 | Detail |
| C2H1g18952 | 1:38,268,703-38,274,072 | - | C1H1g06588 | CX1g004874 | LOC_Os01g74650 | Os01g0978100 | - | Detail |
| C2H1g23413 | 1:38,280,940-38,281,923 | + | C1H1g16241 | CX1g002707 | LOC_Os01g74660 | Os01g0978400 | - | Detail |
| C2H10g06876 | 10:32,383-33,144 | + | C1H10g04037 | - | - | Os10g0100200 | - | Detail |
| C2H10g10175 | 10:33,557-46,360 | - | C1H10g10615 | CX10g007625 | LOC_Os10g01044 | Os10g0100300 | - | Detail |
| C2H10g03638 | 10:64,229-71,091 | + | C1H10g12715 | CX10g008235 | LOC_Os10g01060 | Os10g0100500 | - | Detail |
| C2H10g09829 | 10:129,958-131,890 | - | C1H12g03401 | - | - | - | - | Detail |
| C2H10g03040 | 10:149,381-150,322 | - | C1H10g01786 | CX10g009692 | LOC_Os10g01080 | Os10g0100700 | OsPDX1.2 | Detail |
| C2H10g29939 | 10:171,219-173,645 | + | C1H10g00834 | CX10g010378 | LOC_Os10g01100 | Os10g0101000 | SDRLK-44 | Detail |
| C2H10g13492 | 10:194,898-197,428 | - | C1H10g23663 | CX10g008057 | LOC_Os10g01110 | Os10g0101100 | - | Detail |
| C2H10g26137 | 10:210,919-218,007 | - | C1H10g17975 | CX10g009812 | LOC_Os10g01134 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| C2H10g07312 | 10:240,492-240,941 | + | C1H2g03215 | CX2g024115 | - | - | - | Detail |
| C2H10g06494 | 10:294,697-295,758 | - | C1H10g10888 | CX10g010129 | LOC_Os10g01290 | Os10g0102400 | - | Detail |
| C2H10g14615 | 10:310,986-317,483 | + | C1H10g10334 | CX10g008814 | LOC_Os10g01380 | Os10g0102900 | - | Detail |
| C2H10g02203 | 10:330,405-333,453 | - | C1H10g06516 | CX10g010069 | LOC_Os10g06140 | Os10g0103140 | - | Detail |
| C2H10g20902 | 10:372,399-373,931 | - | C1H10g15181 | CX10g007797 | LOC_Os10g01470 | Os10g0103700 | - | Detail |
| C2H10g05016 | 10:390,083-395,962 | - | C1H10g21883 | CX10g008534 | LOC_Os10g01480 | Os10g0103800 | - | Detail |
| C2H10g23358 | 10:407,716-407,886 | - | C1H10g30809 | CX10g007465 | LOC_Os10g01500 | Os10g0104000 | - | Detail |
| C2H10g24023 | 10:421,458-422,739 | + | C1H10g15868 | CX10g010145 | LOC_Os10g01530 | Os10g0104300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |