| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01467 | 1:20,128,662-20,130,041 | + | C2H1g07845 | CX1g003139 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C1H1g21549 | 1:20,132,981-20,135,917 | - | C2H1g09319 | CX1g000391 | LOC_Os01g39800 | Os01g0580000 | - | Detail |
| C1H1g25713 | 1:20,137,593-20,143,306 | + | C2H1g11799 | CX1g006764 | LOC_Os01g39810 | Os01g0580100 | - | Detail |
| C1H1g21126 | 1:20,153,886-20,159,904 | + | C2H1g14347 | CX1g007091 | LOC_Os01g39830 | Os01g0580200 | - | Detail |
| C1H1g08752 | 1:20,174,783-20,176,028 | + | C2H1g10202 | CX1g001278 | LOC_Os01g39860 | Os01g0580500 | ACO7, OsACO7 | Detail |
| C1H1g22394 | 1:20,179,308-20,184,928 | - | C2H1g22352 | CX1g003562 | LOC_Os01g39890 | Os01g0580800 | - | Detail |
| C1H1g15496 | 1:20,203,430-20,207,433 | + | C2H1g01027 | CX1g003223 | LOC_Os01g39960 | Os01g0581300 | OsLCYe | Detail |
| C1H1g29026 | 1:20,207,976-20,210,678 | + | C2H1g16645 | CX1g001920 | LOC_Os01g39970 | Os01g0581400 | - | Detail |
| C1H1g11792 | 1:20,221,163-20,224,476 | - | C2H1g06478 | CX1g003587 | LOC_Os01g40000 | Os01g0581900 | - | Detail |
| C1H1g19435 | 1:20,250,036-20,254,956 | - | C2H1g21784 | CX1g000670 | LOC_Os01g40050 | Os01g0582400 | - | Detail |
| C1H1g00267 | 1:20,260,116-20,263,371 | + | C2H1g22424 | CX1g004564 | - | - | - | Detail |
| C1H1g12353 | 1:20,282,301-20,288,197 | + | C2H1g13531 | CX1g007125 | LOC_Os01g40094 | Os01g0583100 | - | Detail |
| C1H1g01246 | 1:20,289,721-20,292,468 | - | C2H1g19309 | CX1g005917 | LOC_Os01g40110 | Os01g0583200 | - | Detail |
| C1H1g08692 | 1:20,303,566-20,309,033 | + | C2H1g01103 | CX1g005537 | LOC_Os01g40150 | Os01g0583700 | - | Detail |
| C1H1g16691 | 1:20,314,732-20,315,400 | + | C2H1g12153 | - | LOC_Os01g40170 | Os01g0583900 | - | Detail |
| C1H1g06868 | 1:20,321,392-20,325,171 | + | C2H1g12153 | CX1g005854 | LOC_Os01g40170 | Os01g0583900 | - | Detail |
| C1H1g22381 | 1:20,343,513-20,348,138 | - | C2H1g20455 | CX1g005795 | LOC_Os01g40200 | Os01g0584200 | - | Detail |
| C1H1g29279 | 1:20,351,809-20,352,195 | + | C2H1g06413 | CX1g002664 | LOC_Os01g40220 | - | - | Detail |
| C1H1g13029 | 1:20,357,434-20,375,761 | + | C2H1g09575 | CX1g003373 | LOC_Os01g40250 | Os01g0584800 | - | Detail |
| C1H1g07481 | 1:20,379,086-20,380,030 | + | C2H1g22147 | CX1g004043 | LOC_Os01g40260 | Os01g0584900 | OsWRKY77 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g29268 | 8:23,760,385-23,761,110 | + | - | - | - | Os08g0557150 | - | Detail |
| C2H8g08060 | 8:23,762,014-23,763,033 | - | - | CX8g053270 | - | Os08g0557200 | - | Detail |
| C2H8g03387 | 8:23,767,249-23,768,142 | + | - | CX8g053899 | LOC_Os08g44310 | Os08g0439600 | - | Detail |
| C2H8g08957 | 8:23,768,435-23,772,166 | - | C1H8g21859 | CX8g054736 | LOC_Os08g44320 | Os08g0557400 | - | Detail |
| C2H8g20180 | 8:23,772,680-23,778,104 | + | C1H8g11251 | CX8g051777 | LOC_Os08g44330 | Os08g0557500 | - | Detail |
| C2H8g20392 | 8:23,779,007-23,782,317 | + | C1H8g23781 | CX8g053200 | LOC_Os08g44340 | Os08g0557600 | - | Detail |
| C2H8g12373 | 8:23,784,089-23,788,233 | + | C1H8g01772 | CX8g051253 | LOC_Os08g44350 | Os08g0557700 | AHP1, OHP1, HPt, OsAHP1, Hpt2, Ohp1, OsHP2, OsHpt2, OsHPt2 | Detail |
| C2H8g14066 | 8:23,795,141-23,802,603 | + | C1H8g23400 | CX8g053309 | LOC_Os08g44360 | Os08g0557800 | OsFAR4 | Detail |
| C2H8g17353 | 8:23,802,856-23,806,674 | - | C1H8g28313 | CX8g052319 | LOC_Os08g44370 | Os08g0557900 | - | Detail |
| C2H8g10849 | 8:23,809,809-23,811,252 | + | C1H8g04443 | CX8g050557 | LOC_Os08g44380 | Os08g0558000 | - | Detail |
| C2H8g21533 | 8:23,815,205-23,817,532 | - | C1H8g28050 | CX8g054239 | LOC_Os08g44390 | Os08g0558100 | - | Detail |
| C2H8g14733 | 8:23,820,998-23,823,910 | + | C1H8g20889 | CX8g054438 | LOC_Os08g44400 | Os08g0558200 | OsGRX20 | Detail |
| C2H8g02947 | 8:23,824,811-23,825,389 | + | C1H8g04611 | CX8g053726 | LOC_Os08g44410 | Os08g0558300 | - | Detail |
| C2H8g21192 | 8:23,825,486-23,832,058 | - | C1H8g24914 | CX8g054401 | LOC_Os08g44420 | Os08g0558400 | - | Detail |
| C2H8g30252 | 8:23,835,531-23,837,432 | - | C1H8g29932 | CX8g054264 | LOC_Os08g44430 | Os08g0558600 | - | Detail |
| C2H8g04336 | 8:23,838,981-23,842,241 | - | C1H8g16372 | CX8g051060 | LOC_Os08g44440 | Os08g0558700 | - | Detail |
| C2H8g06651 | 8:23,842,831-23,844,712 | + | C1H8g04443 | CX8g050452 | LOC_Os08g44450 | Os08g0558800 | - | Detail |
| C2H8g25969 | 8:23,846,560-23,849,000 | + | C1H8g25891 | CX8g051182 | LOC_Os08g44460 | Os08g0558900 | IF1-1, IF<sub>1</sub>-1 | Detail |
| C2H8g25077 | 8:23,850,128-23,851,984 | - | C1H8g15584 | CX8g051182 | LOC_Os08g44470 | Os08g0559000 | - | Detail |
| C2H8g13180 | 8:23,853,024-23,854,625 | + | C1H8g09492 | CX8g052056 | LOC_Os08g44480 | Os08g0559200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |