| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19500 | 4:18,883,147-18,884,170 | + | C2H4g09494 | CX4g034176 | - | - | - | Detail |
| C1H4g00410 | 4:18,894,184-18,895,475 | + | C2H4g06819 | CX4g036547 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| C1H4g05515 | 4:18,914,678-18,920,745 | - | C2H4g05233 | CX4g034057 | LOC_Os04g35700 | Os04g0437600 | - | Detail |
| C1H4g09818 | 4:18,951,621-18,953,743 | - | C2H4g05613 | CX4g034717 | LOC_Os04g35760 | Os04g0438300 | - | Detail |
| C1H4g19872 | 4:18,957,695-18,960,072 | - | C2H4g00301 | CX4g033240 | LOC_Os04g35780 | Os04g0438500 | - | Detail |
| C1H4g20672 | 4:18,966,991-18,970,391 | - | C2H4g06596 | CX4g035378 | LOC_Os04g35790 | Os04g0438600 | - | Detail |
| C1H4g03937 | 4:18,972,690-18,981,515 | - | C2H4g10039 | CX4g036235 | LOC_Os04g35800 | Os04g0438700 | - | Detail |
| C1H4g25308 | 4:18,999,670-19,005,452 | + | C2H4g02895 | CX4g035826 | LOC_Os04g35840 | Os04g0439100 | - | Detail |
| C1H4g23816 | 4:19,007,522-19,010,741 | + | C2H4g26325 | CX4g035975 | LOC_Os04g35860 | Os04g0439200 | - | Detail |
| C1H4g19312 | 4:19,011,721-19,012,883 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35864 | Os04g0439300 | - | Detail |
| C1H4g18934 | 4:19,013,356-19,016,908 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35880 | Os04g0439400 | - | Detail |
| C1H4g04660 | 4:19,036,815-19,042,875 | - | C2H4g26224 | CX4g034675 | LOC_Os04g35900 | Os04g0439900 | - | Detail |
| C1H4g14055 | 4:19,044,168-19,046,299 | - | C2H4g24074 | CX4g032186 | LOC_Os04g35910 | Os04g0440000 | - | Detail |
| C1H4g11650 | 4:19,047,100-19,054,833 | - | C2H4g23223 | CX4g035576 | LOC_Os04g35920 | Os04g0440100 | - | Detail |
| C1H4g19673 | 4:19,063,298-19,064,663 | - | C2H4g25260 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g27240 | 4:19,065,863-19,066,443 | - | - | - | - | - | - | Detail |
| C1H4g00512 | 4:19,070,115-19,072,586 | - | C2H4g14486 | CX4g032500 | LOC_Os04g35970 | Os04g0440400 | - | Detail |
| C1H4g26868 | 4:19,076,827-19,078,846 | - | C2H4g19471 | CX4g032500 | LOC_Os04g35970 | Os04g0440300 | - | Detail |
| C1H4g06540 | 4:19,082,502-19,084,567 | - | C2H4g00509 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g31755 | 4:19,088,245-19,090,198 | - | C2H4g22564 | CX4g032500 | LOC_Os04g35990 | Os04g0440300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g17854 | 5:1,986,365-1,989,105 | + | C1H5g06617 | CX5g041028 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |
| C2H5g11120 | 5:1,990,448-1,994,019 | - | C1H5g27337 | CX5g037434 | LOC_Os05g04860 | Os05g0140600 | - | Detail |
| C2H5g05137 | 5:2,001,205-2,002,595 | - | C1H5g07901 | CX5g037644 | LOC_Os05g04870 | Os05g0140800 | - | Detail |
| C2H5g05092 | 5:2,008,868-2,015,794 | - | C1H5g21345 | CX5g040189 | LOC_Os05g04890 | Os05g0141000 | - | Detail |
| C2H5g10662 | 5:2,018,192-2,023,935 | - | C1H5g19698 | CX5g039228 | LOC_Os05g04914 | Os05g0141200 | - | Detail |
| C2H5g22940 | 5:2,033,817-2,036,843 | - | C1H5g02890 | CX5g039514 | LOC_Os05g04940 | Os05g0141400 | - | Detail |
| C2H5g29281 | 5:2,037,481-2,042,234 | - | C1H5g01265 | CX5g037614 | LOC_Os05g04950 | Os05g0141500 | - | Detail |
| C2H5g24711 | 5:2,048,918-2,058,412 | + | C1H5g28545 | CX5g037763 | LOC_Os05g04960 | Os05g0141700 | - | Detail |
| C2H5g02199 | 5:2,132,041-2,135,781 | + | C1H5g21606 | CX5g040648 | LOC_Os05g05130 | Os05g0143200 | - | Detail |
| C2H5g18500 | 5:2,136,267-2,139,691 | - | C1H5g00987 | CX5g038230 | LOC_Os05g05140 | Os05g0143300 | - | Detail |
| C2H5g21384 | 5:2,142,781-2,145,032 | + | C1H5g04744 | CX5g036859 | LOC_Os05g05150 | Os05g0143400 | - | Detail |
| C2H5g29296 | 5:2,147,926-2,155,281 | + | C1H5g27457 | CX5g036917 | LOC_Os05g05160 | Os05g0143500 | - | Detail |
| C2H5g22685 | 5:2,160,044-2,163,492 | - | C1H5g10365 | CX5g037961 | LOC_Os05g05180 | Os05g0143800 | - | Detail |
| C2H5g06932 | 5:2,167,178-2,174,537 | - | C1H5g29191 | CX5g037824 | LOC_Os05g05200 | Os05g0144000 | - | Detail |
| C2H5g15662 | 5:2,175,094-2,179,031 | + | C1H5g02281 | CX5g039026 | LOC_Os05g05210 | Os05g0144100 | - | Detail |
| C2H5g20065 | 5:2,180,104-2,184,321 | - | C1H5g15096 | CX5g038093 | LOC_Os05g05220 | Os05g0144200 | - | Detail |
| C2H5g11901 | 5:2,185,751-2,196,021 | - | C1H5g19739 | CX5g040491 | LOC_Os05g05230 | Os05g0144300 | OsCHR719, CHR719 | Detail |
| C2H5g11499 | 5:2,199,620-2,208,484 | + | C1H5g01986 | CX5g040168 | LOC_Os05g05240 | Os05g0144400 | OsPPKL2 | Detail |
| C2H5g14473 | 5:2,214,177-2,219,891 | - | C1H5g16759 | CX5g037072 | LOC_Os05g05260 | Os05g0144800 | - | Detail |
| C2H5g09730 | 5:2,225,114-2,228,156 | + | C1H5g20568 | CX5g039685 | LOC_Os05g05270 | Os05g0144900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |