| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19500 | 4:18,883,147-18,884,170 | + | C2H4g09494 | CX4g034176 | - | - | - | Detail |
| C1H4g00410 | 4:18,894,184-18,895,475 | + | C2H4g06819 | CX4g036547 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| C1H4g05515 | 4:18,914,678-18,920,745 | - | C2H4g05233 | CX4g034057 | LOC_Os04g35700 | Os04g0437600 | - | Detail |
| C1H4g09818 | 4:18,951,621-18,953,743 | - | C2H4g05613 | CX4g034717 | LOC_Os04g35760 | Os04g0438300 | - | Detail |
| C1H4g19872 | 4:18,957,695-18,960,072 | - | C2H4g00301 | CX4g033240 | LOC_Os04g35780 | Os04g0438500 | - | Detail |
| C1H4g20672 | 4:18,966,991-18,970,391 | - | C2H4g06596 | CX4g035378 | LOC_Os04g35790 | Os04g0438600 | - | Detail |
| C1H4g03937 | 4:18,972,690-18,981,515 | - | C2H4g10039 | CX4g036235 | LOC_Os04g35800 | Os04g0438700 | - | Detail |
| C1H4g25308 | 4:18,999,670-19,005,452 | + | C2H4g02895 | CX4g035826 | LOC_Os04g35840 | Os04g0439100 | - | Detail |
| C1H4g23816 | 4:19,007,522-19,010,741 | + | C2H4g26325 | CX4g035975 | LOC_Os04g35860 | Os04g0439200 | - | Detail |
| C1H4g19312 | 4:19,011,721-19,012,883 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35864 | Os04g0439300 | - | Detail |
| C1H4g18934 | 4:19,013,356-19,016,908 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35880 | Os04g0439400 | - | Detail |
| C1H4g04660 | 4:19,036,815-19,042,875 | - | C2H4g26224 | CX4g034675 | LOC_Os04g35900 | Os04g0439900 | - | Detail |
| C1H4g14055 | 4:19,044,168-19,046,299 | - | C2H4g24074 | CX4g032186 | LOC_Os04g35910 | Os04g0440000 | - | Detail |
| C1H4g11650 | 4:19,047,100-19,054,833 | - | C2H4g23223 | CX4g035576 | LOC_Os04g35920 | Os04g0440100 | - | Detail |
| C1H4g19673 | 4:19,063,298-19,064,663 | - | C2H4g25260 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g27240 | 4:19,065,863-19,066,443 | - | - | - | - | - | - | Detail |
| C1H4g00512 | 4:19,070,115-19,072,586 | - | C2H4g14486 | CX4g032500 | LOC_Os04g35970 | Os04g0440400 | - | Detail |
| C1H4g26868 | 4:19,076,827-19,078,846 | - | C2H4g19471 | CX4g032500 | LOC_Os04g35970 | Os04g0440300 | - | Detail |
| C1H4g06540 | 4:19,082,502-19,084,567 | - | C2H4g00509 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g31755 | 4:19,088,245-19,090,198 | - | C2H4g22564 | CX4g032500 | LOC_Os04g35990 | Os04g0440300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05843 | 1:4,407,490-4,408,767 | + | C1H1g27970 | CX1g005975 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| C2H1g21862 | 1:4,408,888-4,411,145 | - | C1H1g11468 | CX1g003550 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| C2H1g17174 | 1:4,413,170-4,417,512 | - | C1H1g10688 | CX1g000614 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| C2H1g04548 | 1:4,423,648-4,432,522 | + | C1H1g13152 | CX1g006629 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| C2H1g08327 | 1:4,432,798-4,436,269 | - | C1H1g06151 | CX1g002400 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| C2H1g05163 | 1:4,446,890-4,449,014 | - | C1H1g16281 | CX1g002653 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| C2H1g20037 | 1:4,454,004-4,458,589 | - | C1H1g29130 | CX1g000713 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| C2H1g05731 | 1:4,471,137-4,471,517 | + | C1H1g15115 | CX1g000442 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| C2H1g26832 | 1:4,481,098-4,483,672 | + | C1H1g00947 | CX1g005498 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| C2H1g03615 | 1:4,491,235-4,498,330 | - | C1H1g03034 | CX1g000509 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| C2H1g17887 | 1:4,508,755-4,509,393 | - | C1H1g10561 | CX1g001794 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| C2H1g12953 | 1:4,510,080-4,512,668 | - | - | - | - | - | - | Detail |
| C2H1g30117 | 1:4,514,337-4,515,203 | - | C1H1g31641 | CX1g003898 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| C2H1g28884 | 1:4,521,724-4,524,029 | - | C1H1g28666 | CX1g000703 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| C2H1g00669 | 1:4,526,288-4,526,542 | + | C1H1g30631 | - | - | - | - | Detail |
| C2H1g23471 | 1:4,532,493-4,532,820 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09900 | Os01g0195700 | - | Detail |
| C2H1g25043 | 1:4,532,942-4,533,980 | + | C1H1g02897 | CX1g006997 | LOC_Os01g09900 | Os01g0195801 | - | Detail |
| C2H1g19433 | 1:4,541,970-4,542,264 | - | C1H1g13131 | CX12g016171 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| C2H1g29514 | 1:4,549,728-4,555,017 | + | C1H1g28746 | CX1g006997 | LOC_Os01g09930 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| C2H1g19303 | 1:4,570,603-4,572,287 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |