| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19500 | 4:18,883,147-18,884,170 | + | C2H4g09494 | CX4g034176 | - | - | - | Detail |
| C1H4g00410 | 4:18,894,184-18,895,475 | + | C2H4g06819 | CX4g036547 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| C1H4g05515 | 4:18,914,678-18,920,745 | - | C2H4g05233 | CX4g034057 | LOC_Os04g35700 | Os04g0437600 | - | Detail |
| C1H4g09818 | 4:18,951,621-18,953,743 | - | C2H4g05613 | CX4g034717 | LOC_Os04g35760 | Os04g0438300 | - | Detail |
| C1H4g19872 | 4:18,957,695-18,960,072 | - | C2H4g00301 | CX4g033240 | LOC_Os04g35780 | Os04g0438500 | - | Detail |
| C1H4g20672 | 4:18,966,991-18,970,391 | - | C2H4g06596 | CX4g035378 | LOC_Os04g35790 | Os04g0438600 | - | Detail |
| C1H4g03937 | 4:18,972,690-18,981,515 | - | C2H4g10039 | CX4g036235 | LOC_Os04g35800 | Os04g0438700 | - | Detail |
| C1H4g25308 | 4:18,999,670-19,005,452 | + | C2H4g02895 | CX4g035826 | LOC_Os04g35840 | Os04g0439100 | - | Detail |
| C1H4g23816 | 4:19,007,522-19,010,741 | + | C2H4g26325 | CX4g035975 | LOC_Os04g35860 | Os04g0439200 | - | Detail |
| C1H4g19312 | 4:19,011,721-19,012,883 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35864 | Os04g0439300 | - | Detail |
| C1H4g18934 | 4:19,013,356-19,016,908 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35880 | Os04g0439400 | - | Detail |
| C1H4g04660 | 4:19,036,815-19,042,875 | - | C2H4g26224 | CX4g034675 | LOC_Os04g35900 | Os04g0439900 | - | Detail |
| C1H4g14055 | 4:19,044,168-19,046,299 | - | C2H4g24074 | CX4g032186 | LOC_Os04g35910 | Os04g0440000 | - | Detail |
| C1H4g11650 | 4:19,047,100-19,054,833 | - | C2H4g23223 | CX4g035576 | LOC_Os04g35920 | Os04g0440100 | - | Detail |
| C1H4g19673 | 4:19,063,298-19,064,663 | - | C2H4g25260 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g27240 | 4:19,065,863-19,066,443 | - | - | - | - | - | - | Detail |
| C1H4g00512 | 4:19,070,115-19,072,586 | - | C2H4g14486 | CX4g032500 | LOC_Os04g35970 | Os04g0440400 | - | Detail |
| C1H4g26868 | 4:19,076,827-19,078,846 | - | C2H4g19471 | CX4g032500 | LOC_Os04g35970 | Os04g0440300 | - | Detail |
| C1H4g06540 | 4:19,082,502-19,084,567 | - | C2H4g00509 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g31755 | 4:19,088,245-19,090,198 | - | C2H4g22564 | CX4g032500 | LOC_Os04g35990 | Os04g0440300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g29411 | 6:7,864,739-7,866,838 | + | C1H6g22454 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C2H6g08784 | 6:7,871,922-7,873,753 | + | C1H6g18150 | CX6g042085 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C2H6g23301 | 6:7,884,256-7,892,276 | + | C1H6g11842 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C2H6g18739 | 6:7,894,575-7,896,559 | - | C1H6g22322 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C2H6g26801 | 6:7,902,080-7,903,897 | + | C1H6g28161 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C2H6g08900 | 6:7,906,068-7,906,865 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g26383 | 6:7,907,925-7,908,182 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g04388 | 6:7,918,732-7,927,129 | + | C1H6g22180 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C2H6g05369 | 6:7,928,735-7,942,153 | + | C1H6g11424 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C2H6g15127 | 6:7,942,274-7,947,309 | - | C1H6g04853 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C2H6g23432 | 6:7,966,579-7,969,484 | + | C1H6g01958 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C2H6g19168 | 6:7,971,257-7,978,687 | + | C1H6g15789 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C2H6g18561 | 6:7,996,540-7,999,087 | - | C1H6g25163 | CX6g044986 | LOC_Os06g16480 | - | - | Detail |
| C2H6g19122 | 6:8,079,153-8,080,276 | - | - | - | - | - | - | Detail |
| C2H6g04931 | 6:8,084,494-8,085,057 | + | - | CX6g044232 | - | - | - | Detail |
| C2H6g13388 | 6:8,092,233-8,094,811 | - | C1H6g04878 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C2H6g03383 | 6:8,249,187-8,251,271 | - | C1H6g07720 | CX6g041915 | LOC_Os06g16960 | Os06g0281300 | - | Detail |
| C2H6g14158 | 6:8,254,913-8,270,740 | - | C1H6g18405 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C2H6g29390 | 6:8,271,561-8,271,848 | - | C1H6g06414 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| C2H6g13653 | 6:8,275,391-8,277,642 | - | C1H6g17072 | CX6g042800 | LOC_Os06g17000 | Os06g0281800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |