| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08631 | 4:18,121,099-18,123,849 | - | C2H4g24066 | CX4g032627 | LOC_Os04g34490 | Os04g0422300 | - | Detail |
| C1H4g21835 | 4:18,141,712-18,146,933 | + | C2H4g10014 | CX4g034213 | LOC_Os04g34530 | Os04g0422600 | - | Detail |
| C1H4g15469 | 4:18,147,402-18,148,729 | - | C2H4g15959 | - | LOC_Os04g34540 | Os04g0422700 | - | Detail |
| C1H4g24085 | 4:18,161,822-18,163,879 | + | C2H4g03864 | CX4g035191 | LOC_Os04g34580 | Os04g0423100 | - | Detail |
| C1H4g00658 | 4:18,169,488-18,170,778 | - | C2H4g17951 | CX4g036598 | LOC_Os04g34600 | Os04g0423400 | - | Detail |
| C1H4g11899 | 4:18,179,623-18,183,664 | - | C2H4g22006 | - | LOC_Os04g34610 | Os04g0423600 | - | Detail |
| C1H4g15226 | 4:18,184,501-18,187,329 | - | C2H4g00874 | CX4g033739 | LOC_Os04g34620 | Os04g0423700 | - | Detail |
| C1H4g04108 | 4:18,193,913-18,200,114 | + | C2H4g03351 | CX4g034218 | LOC_Os04g34670 | Os04g0424200 | OsDNA2_17 | Detail |
| C1H4g29348 | 4:18,209,780-18,218,749 | + | C2H4g04488 | CX4g036298 | LOC_Os04g34720 | Os04g0425100 | - | Detail |
| C1H4g11803 | 4:18,365,658-18,368,872 | - | C2H4g00219 | CX4g033205 | LOC_Os04g34930 | Os04g0428900 | - | Detail |
| C1H4g31132 | 4:18,370,826-18,371,227 | + | - | - | - | - | - | Detail |
| C1H4g21640 | 4:18,379,165-18,381,693 | - | C2H4g26513 | CX4g034835 | LOC_Os04g34940 | Os04g0428950 | - | Detail |
| C1H4g19022 | 4:18,388,925-18,389,698 | - | C2H4g12069 | CX4g033075 | LOC_Os04g34970 | Os04g0429050 | - | Detail |
| C1H4g13260 | 4:18,397,363-18,402,415 | + | C2H4g26187 | CX4g034286 | LOC_Os04g34976 | Os04g0429100 | OsSET19, SDG708 | Detail |
| C1H4g08749 | 4:18,403,935-18,408,254 | + | C2H4g07693 | CX4g032065 | LOC_Os04g34984 | Os04g0429200 | - | Detail |
| C1H4g29079 | 4:18,411,660-18,413,896 | + | C2H4g22507 | CX4g035546 | LOC_Os04g35000 | Os04g0429300 | - | Detail |
| C1H4g16663 | 4:18,416,947-18,419,587 | + | C2H4g06383 | CX4g034846 | LOC_Os04g35010 | Os04g0429400 | - | Detail |
| C1H4g22025 | 4:18,419,923-18,423,699 | - | C2H4g12633 | CX4g036089 | LOC_Os04g35020 | Os04g0429500 | OsCSLH2 | Detail |
| C1H4g20886 | 4:18,426,775-18,432,164 | - | C2H4g11608 | CX4g036148 | LOC_Os04g35030 | Os04g0429600 | OsCSLH3 | Detail |
| C1H4g07556 | 4:18,468,044-18,475,551 | + | C2H4g05154 | CX4g035578 | LOC_Os04g35060 | Os04g0429800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g00265 | 11:16,017,977-16,018,242 | + | C1H11g04694 | - | - | - | - | Detail |
| C2H11g03682 | 11:16,019,282-16,020,371 | + | C1H11g22326 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C2H11g12950 | 11:16,055,498-16,056,635 | - | C1H11g18981 | CX11g012904 | - | - | - | Detail |
| C2H11g07707 | 11:16,058,802-16,062,787 | - | C1H11g04733 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C2H11g24452 | 11:16,083,324-16,085,813 | - | C1H11g01433 | CX11g011882 | - | - | - | Detail |
| C2H11g19133 | 11:16,101,966-16,104,538 | + | C1H11g28049 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C2H11g00051 | 11:16,106,403-16,112,480 | - | C1H11g02002 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| C2H11g25408 | 11:16,116,383-16,122,093 | - | C1H11g16532 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C2H11g13604 | 11:16,175,027-16,183,838 | + | C1H11g15164 | CX11g012879 | - | - | - | Detail |
| C2H11g14886 | 11:16,212,809-16,215,231 | - | C1H11g17370 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C2H11g10237 | 11:16,225,735-16,229,982 | - | C1H11g16566 | - | - | - | - | Detail |
| C2H11g01178 | 11:16,265,929-16,267,830 | + | C1H11g06724 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C2H11g11640 | 11:16,271,802-16,273,910 | + | C1H11g14895 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C2H11g24382 | 11:16,278,637-16,280,896 | + | C1H11g00143 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C2H11g26741 | 11:16,289,112-16,291,043 | + | C1H11g30952 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C2H11g02622 | 11:16,298,647-16,298,982 | + | C1H11g16256 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C2H11g28267 | 11:16,341,430-16,350,415 | - | C1H11g13788 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C2H11g17850 | 11:16,353,764-16,355,586 | - | C1H11g31406 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g12230 | 11:16,373,799-16,375,853 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g06164 | 11:16,376,216-16,378,142 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |