| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10509 | 4:17,589,521-17,590,533 | + | C2H4g21488 | - | - | - | - | Detail |
| C1H4g28526 | 4:17,590,667-17,592,375 | - | C2H4g29020 | CX4g032279 | LOC_Os04g33530 | Os04g0410600 | - | Detail |
| C1H4g10207 | 4:17,611,929-17,612,785 | - | C2H4g02433 | - | - | Os04g0411100 | - | Detail |
| C1H4g13967 | 4:17,612,834-17,613,133 | + | C2H4g19013 | CX4g035834 | LOC_Os04g33560 | Os04g0411200 | - | Detail |
| C1H4g02095 | 4:17,616,514-17,617,085 | + | C2H4g14818 | CX4g035203 | - | - | - | Detail |
| C1H4g06511 | 4:17,626,583-17,628,114 | - | C2H4g06840 | CX4g034096 | LOC_Os04g33570 | Os04g0411400 | RCN4 | Detail |
| C1H4g03675 | 4:17,636,484-17,637,490 | + | C2H4g13082 | - | LOC_Os04g33580 | - | - | Detail |
| C1H4g15857 | 4:17,643,095-17,645,648 | + | - | - | - | - | - | Detail |
| C1H4g04480 | 4:17,654,285-17,659,578 | + | C2H4g18183 | CX4g034692 | LOC_Os04g33590 | Os04g0411800 | - | Detail |
| C1H4g28107 | 4:17,661,844-17,666,607 | + | C2H4g17971 | CX4g035360 | LOC_Os04g33600 | Os04g0412000 | - | Detail |
| C1H4g02994 | 4:17,674,149-17,674,772 | + | C2H4g01788 | CX4g035334 | LOC_Os04g33610 | Os04g0412100 | OsBIC1 | Detail |
| C1H4g08221 | 4:17,686,209-17,686,667 | + | C2H4g00589 | CX4g033895 | LOC_Os04g33630 | Os04g0412200 | - | Detail |
| C1H4g17898 | 4:17,688,326-17,688,592 | + | - | - | LOC_Os08g05460 | - | - | Detail |
| C1H4g31611 | 4:17,692,357-17,698,210 | + | C2H4g24079 | CX4g031818 | LOC_Os04g33640 | Os04g0412300 | - | Detail |
| C1H4g08556 | 4:17,706,346-17,707,891 | + | C2H4g24079 | CX4g035419 | LOC_Os04g33660 | Os04g0412500 | - | Detail |
| C1H4g15980 | 4:17,720,171-17,728,214 | + | C2H4g27573 | CX4g035285 | LOC_Os04g33690 | Os04g0412900 | - | Detail |
| C1H4g11558 | 4:17,728,418-17,732,847 | - | C2H4g17905 | CX4g032656 | LOC_Os04g33700 | Os04g0413000 | - | Detail |
| C1H4g19570 | 4:17,735,590-17,737,176 | + | C2H4g06805 | CX4g033899 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| C1H4g31098 | 4:17,737,261-17,737,989 | + | C2H4g06805 | CX4g033899 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| C1H4g06839 | 4:17,742,784-17,747,956 | + | C2H4g13973 | CX4g035303 | LOC_Os04g33740 | Os04g0413500 | GIF1, gif1, CIN2, OsCIN2, OsGIF1, WB1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03354 | 4:24,370,758-24,379,739 | - | C1H4g11500 | CX4g032075 | LOC_Os04g47700 | Os04g0564700 | - | Detail |
| C2H4g19275 | 4:24,383,055-24,384,449 | + | C1H4g14049 | CX4g034423 | LOC_Os04g47720 | Os04g0565200 | - | Detail |
| C2H4g12702 | 4:24,387,936-24,389,330 | + | C1H4g12974 | CX4g033452 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| C2H4g08404 | 4:24,390,581-24,391,839 | - | C1H4g31632 | - | - | Os04g0565450 | - | Detail |
| C2H4g19005 | 4:24,393,380-24,394,663 | - | C1H4g26844 | CX4g033372 | LOC_Os04g47780 | Os04g0565500 | - | Detail |
| C2H4g09609 | 4:24,403,227-24,405,410 | - | C1H4g15072 | CX4g033977 | LOC_Os04g47810 | Os04g0565900 | - | Detail |
| C2H4g21812 | 4:24,409,427-24,409,792 | - | - | CX4g032145 | LOC_Os04g47820 | Os04g0566000 | - | Detail |
| C2H4g10718 | 4:24,412,257-24,420,032 | + | C1H4g12877 | CX4g035302 | LOC_Os04g47830 | Os04g0566100 | OsCHR714, CHR714 | Detail |
| C2H4g12035 | 4:24,455,481-24,457,546 | + | C1H4g23807 | CX4g031939 | LOC_Os04g47860 | Os04g0566400 | IDD10, OsIDD10 | Detail |
| C2H4g15154 | 4:24,459,690-24,461,186 | + | C1H4g23807 | CX4g031939 | LOC_Os04g47860 | Os02g0672100 | OsIDD4, SID1 | Detail |
| C2H4g00740 | 4:24,469,974-24,479,404 | - | C1H4g26156 | CX4g034886 | LOC_Os04g47870 | Os04g0566500 | - | Detail |
| C2H4g20556 | 4:24,514,806-24,517,941 | + | C1H4g22653 | CX4g033126 | LOC_Os04g47890 | Os04g0566600 | MOF1, MFS2 | Detail |
| C2H4g16258 | 4:24,522,513-24,523,088 | - | - | CX4g033952 | LOC_Os04g47900 | Os04g0566700 | - | Detail |
| C2H4g14707 | 4:24,527,059-24,537,528 | - | C1H4g17812 | CX4g032363 | LOC_Os04g47912 | Os04g0566800 | - | Detail |
| C2H4g15294 | 4:24,540,750-24,542,539 | - | C1H4g21181 | CX4g031995 | LOC_Os04g47930 | Os04g0567200 | - | Detail |
| C2H4g26180 | 4:24,556,106-24,559,191 | + | C1H4g12555 | CX4g035866 | LOC_Os04g47970 | Os04g0567700 | - | Detail |
| C2H4g30292 | 4:24,567,615-24,569,670 | - | C1H4g18335 | CX4g035043 | LOC_Os04g47990 | Os04g0567800 | OsDOF18 | Detail |
| C2H4g14855 | 4:24,599,448-24,603,311 | + | C1H4g26603 | CX4g033760 | LOC_Os04g48010 | Os04g0568400 | OsKRN2 | Detail |
| C2H4g14653 | 4:24,608,845-24,609,432 | + | C1H4g30299 | CX4g034406 | LOC_Os04g48020 | Os04g0568600 | - | Detail |
| C2H4g13784 | 4:24,610,201-24,611,230 | + | C1H4g25602 | - | LOC_Os04g48030 | Os04g0568700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |