| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16846 | 4:17,416,980-17,419,232 | - | C2H4g04199 | CX4g034969 | LOC_Os04g33240 | Os04g0405300 | - | Detail |
| C1H4g08512 | 4:17,424,727-17,425,920 | - | C2H4g22752 | CX4g035634 | LOC_Os04g33260 | Os04g0405500 | - | Detail |
| C1H4g22964 | 4:17,429,536-17,436,004 | - | C2H4g29855 | CX4g036572 | LOC_Os04g33280 | Os04g0405600 | - | Detail |
| C1H4g28128 | 4:17,440,260-17,440,926 | + | C2H4g13454 | CX4g034784 | LOC_Os04g33290 | Os04g0477900 | - | Detail |
| C1H4g08917 | 4:17,446,901-17,449,788 | + | C2H4g13060 | CX4g033122 | LOC_Os04g33300 | Os04g0405800 | - | Detail |
| C1H4g24026 | 4:17,451,283-17,452,777 | - | C2H4g03472 | CX4g032232 | LOC_Os04g33310 | Os04g0405900 | - | Detail |
| C1H4g30658 | 4:17,475,456-17,475,692 | - | C2H4g07196 | - | - | - | - | Detail |
| C1H4g14696 | 4:17,479,922-17,480,842 | - | C2H4g21779 | - | LOC_Os04g33330 | Os04g0407300 | - | Detail |
| C1H4g11703 | 4:17,492,946-17,494,082 | + | C2H4g19229 | CX4g034898 | LOC_Os04g33360 | Os04g0407800 | - | Detail |
| C1H4g12008 | 4:17,526,355-17,527,671 | - | C2H4g17180 | CX4g034577 | LOC_Os04g33450 | Os04g0408600 | - | Detail |
| C1H4g11861 | 4:17,529,868-17,531,061 | - | C2H4g24924 | CX4g033600 | LOC_Os04g33440 | Os04g0408700 | - | Detail |
| C1H4g11809 | 4:17,533,613-17,536,234 | - | C2H4g01925 | CX4g033600 | LOC_Os04g33420 | Os04g0408900 | - | Detail |
| C1H4g28635 | 4:17,538,096-17,540,106 | - | C2H4g16116 | CX4g036549 | LOC_Os04g33400 | Os04g0409100 | - | Detail |
| C1H4g20347 | 4:17,540,606-17,549,663 | - | C2H4g00586 | CX4g035756 | LOC_Os04g33460 | Os04g0409200 | OsBEIIa, OsSBE4, RBE4 | Detail |
| C1H4g12620 | 4:17,551,473-17,556,334 | - | C2H4g11616 | CX4g033786 | LOC_Os04g33470 | Os04g0409500 | - | Detail |
| C1H4g14413 | 4:17,556,375-17,561,961 | + | C2H4g17999 | CX4g032352 | LOC_Os04g33480 | Os04g0409600 | DSL1, OsHDA711 | Detail |
| C1H4g17013 | 4:17,562,295-17,565,277 | + | C2H4g14351 | CX4g032016 | LOC_Os04g33490 | Os04g0409900 | - | Detail |
| C1H4g22622 | 4:17,565,695-17,569,649 | - | C2H4g05689 | CX4g034768 | LOC_Os04g33500 | Os04g0410200 | - | Detail |
| C1H4g23649 | 4:17,583,893-17,586,377 | + | C2H4g27427 | CX4g031458 | LOC_Os04g33510 | Os04g0410300 | - | Detail |
| C1H4g05147 | 4:17,587,346-17,588,552 | + | C2H4g01491 | CX4g034502 | LOC_Os04g33520 | Os04g0410400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |