| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14689 | 4:17,498,476-17,499,604 | + | C1H4g00507 | CX4g034163 | LOC_Os04g33870 | Os04g0415100 | - | Detail |
| C2H4g24946 | 4:17,505,394-17,507,226 | + | C1H4g11437 | CX4g033864 | LOC_Os04g33880 | Os04g0415200 | - | Detail |
| C2H4g19875 | 4:17,512,048-17,512,605 | + | - | - | LOC_Os04g33900 | Os04g0415600 | - | Detail |
| C2H4g19861 | 4:17,518,322-17,518,997 | + | C1H4g17536 | CX4g032762 | LOC_Os04g33920 | Os04g0415800 | - | Detail |
| C2H4g09747 | 4:17,522,153-17,523,007 | + | C1H4g29189 | CX4g034185 | LOC_Os04g33930 | Os04g0415800 | - | Detail |
| C2H4g16694 | 4:17,523,874-17,524,605 | + | C1H4g07179 | CX4g035734 | LOC_Os04g33940 | Os04g0416000 | - | Detail |
| C2H4g00223 | 4:17,524,897-17,530,291 | - | C1H4g19958 | CX4g035193 | LOC_Os04g33950 | Os04g0416100 | OsE2Fa-3 | Detail |
| C2H4g02278 | 4:17,536,101-17,537,996 | + | C1H4g19221 | CX4g036299 | LOC_Os04g33970 | Os04g0416400 | - | Detail |
| C2H4g08743 | 4:17,539,031-17,539,603 | + | C1H4g02442 | CX4g036299 | LOC_Os04g33970 | - | - | Detail |
| C2H4g02387 | 4:17,544,023-17,547,683 | + | C1H4g24309 | CX4g035969 | LOC_Os04g33980 | Os04g0416500 | - | Detail |
| C2H4g26517 | 4:17,554,892-17,556,067 | - | C1H4g25538 | CX4g032955 | LOC_Os04g33990 | Os04g0416700 | - | Detail |
| C2H4g30043 | 4:17,560,725-17,561,271 | + | C1H4g18396 | CX4g034560 | - | - | - | Detail |
| C2H4g21787 | 4:17,563,491-17,570,569 | + | C1H4g22240 | CX4g036482 | LOC_Os04g34000 | Os04g0416900 | - | Detail |
| C2H4g11943 | 4:17,569,516-17,572,602 | - | C1H4g22652 | CX4g032874 | LOC_Os04g34010 | Os04g0417000 | - | Detail |
| C2H4g28743 | 4:17,619,939-17,620,557 | + | - | - | - | - | - | Detail |
| C2H4g20144 | 4:17,628,933-17,633,909 | - | C1H4g23500 | CX4g031544 | LOC_Os04g34080 | Os04g0417800 | - | Detail |
| C2H4g01329 | 4:17,642,352-17,645,445 | + | C1H4g21415 | CX4g032049 | LOC_Os04g34100 | Os04g0418000 | - | Detail |
| C2H4g00094 | 4:17,678,396-17,679,615 | - | C1H4g23677 | CX4g033097 | LOC_Os12g23430 | - | - | Detail |
| C2H4g14390 | 4:17,680,154-17,681,298 | - | C1H4g22739 | CX4g033097 | LOC_Os12g23400 | - | - | Detail |
| C2H4g10939 | 4:17,686,820-17,687,191 | + | C1H4g13632 | CX4g032730 | LOC_Os04g34150 | Os04g0418600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |