| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |