| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g06063 | 5:24,227,949-24,228,337 | - | C1H5g24861 | CX5g040775 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| C2H5g20886 | 5:24,234,211-24,236,934 | + | C1H5g08314 | CX5g040870 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| C2H5g02301 | 5:24,245,198-24,252,268 | + | C1H5g24542 | CX5g038555 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| C2H5g26213 | 5:24,252,986-24,258,173 | - | C1H5g04263 | CX5g040137 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| C2H5g13644 | 5:24,267,382-24,274,222 | + | C1H5g02145 | CX5g037650 | LOC_Os05g50410 | Os05g0580500 | REC8, OsREC8, OsRad21-4 | Detail |
| C2H5g28264 | 5:24,275,300-24,277,357 | + | C1H5g24080 | CX5g040658 | LOC_Os05g50460 | Os05g0581300 | - | Detail |
| C2H5g17272 | 5:24,287,987-24,288,808 | + | C1H5g06864 | CX5g037923 | LOC_Os05g50470 | Os05g0581700 | - | Detail |
| C2H5g15909 | 5:24,293,643-24,302,000 | + | C1H5g11608 | CX5g037805 | LOC_Os05g50480 | Os05g0581800 | - | Detail |
| C2H5g13600 | 5:24,304,172-24,308,102 | - | C1H5g02099 | CX5g040560 | LOC_Os05g50490 | Os05g0581900 | - | Detail |
| C2H5g26948 | 5:24,311,084-24,311,986 | - | C1H5g24313 | CX5g037615 | LOC_Os05g50500 | Os05g0582000 | - | Detail |
| C2H5g11127 | 5:24,313,376-24,319,021 | - | C1H5g00717 | CX5g037117 | LOC_Os05g50510 | Os05g0582100 | - | Detail |
| C2H5g24114 | 5:24,323,559-24,327,056 | + | C1H5g14623 | CX5g040852 | LOC_Os05g50550 | Os05g0582300 | OsSPS2 | Detail |
| C2H5g18684 | 5:24,328,802-24,335,158 | + | C1H5g08047 | CX5g037924 | LOC_Os05g50560 | Os05g0143500 | - | Detail |
| C2H5g28002 | 5:24,335,398-24,336,717 | + | C1H5g30800 | CX5g036920 | LOC_Os05g50570 | Os05g0582500 | - | Detail |
| C2H5g18541 | 5:24,339,476-24,340,831 | + | C1H5g18687 | CX5g038472 | LOC_Os05g50580 | Os05g0582600 | - | Detail |
| C2H5g00525 | 5:24,342,461-24,343,789 | + | C1H5g25143 | CX5g036839 | LOC_Os05g50600 | Os05g0582800 | - | Detail |
| C2H5g09834 | 5:24,346,063-24,347,969 | - | C1H5g31178 | CX5g039759 | LOC_Os05g50610 | Os05g0583000 | - | Detail |
| C2H5g27671 | 5:24,356,062-24,358,230 | + | C1H5g13626 | CX5g039128 | LOC_Os05g50624 | Os05g0583100 | - | Detail |
| C2H5g14974 | 5:24,358,658-24,366,410 | + | C1H5g29188 | CX5g037059 | LOC_Os05g50640 | Os05g0583200 | - | Detail |
| C2H5g15690 | 5:24,367,658-24,367,918 | + | C1H5g12832 | CX5g038734 | LOC_Os05g50654 | Os05g0583400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |