| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00221 | 4:16,654,068-16,657,405 | - | - | - | - | - | - | Detail |
| C1H4g00621 | 4:16,659,035-16,662,449 | + | C2H4g20464 | - | LOC_Os04g32220 | Os04g0393200 | - | Detail |
| C1H4g11686 | 4:16,672,123-16,672,608 | + | C2H4g13351 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C1H4g20056 | 4:16,673,986-16,676,441 | + | C2H4g20464 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C1H4g08605 | 4:16,680,567-16,684,626 | - | C2H4g11378 | CX4g036058 | LOC_Os04g32270 | Os04g0393300 | - | Detail |
| C1H4g12865 | 4:16,710,219-16,715,569 | + | C2H4g10960 | CX4g034279 | LOC_Os04g32310 | Os04g0393900 | - | Detail |
| C1H4g06922 | 4:16,720,019-16,723,230 | + | C2H4g18193 | CX4g034392 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| C1H4g17845 | 4:16,725,013-16,729,329 | + | C2H4g16524 | CX4g035538 | LOC_Os04g32330 | Os04g0394200 | - | Detail |
| C1H4g05869 | 4:16,729,859-16,737,578 | - | C2H4g25961 | CX4g034536 | LOC_Os04g32340 | Os04g0394300 | - | Detail |
| C1H4g02701 | 4:16,741,767-16,749,994 | - | C2H4g27874 | CX4g036042 | LOC_Os04g32350 | Os04g0394500 | DGS1, RPC4 | Detail |
| C1H4g04290 | 4:16,760,267-16,767,220 | + | C2H4g13468 | CX4g032930 | LOC_Os04g32370 | Os04g0394700 | - | Detail |
| C1H4g22256 | 4:16,783,814-16,788,244 | - | C2H4g07831 | CX4g033841 | LOC_Os04g32460 | Os04g0395600 | - | Detail |
| C1H4g04595 | 4:16,805,450-16,806,705 | - | - | - | - | - | - | Detail |
| C1H4g21629 | 4:16,809,914-16,810,450 | - | C2H4g01216 | CX4g036177 | LOC_Os04g32470 | Os04g0395700 | - | Detail |
| C1H4g00131 | 4:16,823,498-16,827,263 | + | C2H4g05465 | CX4g033931 | LOC_Os04g32480 | Os04g0395800 | - | Detail |
| C1H4g20584 | 4:16,829,647-16,835,344 | - | C2H4g15362 | CX4g035337 | LOC_Os04g32490 | Os04g0395900 | - | Detail |
| C1H4g10776 | 4:16,899,462-16,911,243 | + | C2H4g27206 | CX4g031625 | LOC_Os04g32510 | Os04g0396500 | LAX2 | Detail |
| C1H4g30291 | 4:16,928,629-16,932,405 | + | C2H4g12362 | CX4g032605 | LOC_Os04g32540 | Os04g0396800 | - | Detail |
| C1H4g11763 | 4:16,937,937-16,939,103 | + | C2H4g11756 | CX4g036117 | LOC_Os04g32550 | Os04g0397000 | - | Detail |
| C1H4g04793 | 4:16,940,329-16,946,897 | - | C2H4g07574 | CX4g034837 | LOC_Os04g32560 | Os04g0397100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15807 | 2:5,046,468-5,051,199 | + | C1H2g10529 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C2H2g25569 | 2:5,052,010-5,058,918 | - | C1H2g05539 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C2H2g18783 | 2:5,072,117-5,073,751 | - | C1H2g08158 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C2H2g11987 | 2:5,088,073-5,089,026 | - | C1H2g24423 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C2H2g02789 | 2:5,093,736-5,096,612 | + | C1H2g30492 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C2H2g20503 | 2:5,097,184-5,098,473 | - | C1H2g18635 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C2H2g05452 | 2:5,104,599-5,110,437 | - | C1H2g14720 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C2H2g30668 | 2:5,113,316-5,118,771 | - | C1H2g22079 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C2H2g20119 | 2:5,123,316-5,128,196 | + | C1H2g00290 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C2H2g08800 | 2:5,130,998-5,133,053 | - | C1H2g01509 | CX2g020248 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C2H2g20788 | 2:5,137,722-5,141,639 | + | C1H2g22046 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C2H2g24738 | 2:5,142,524-5,145,851 | - | C1H2g10608 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C2H2g10447 | 2:5,155,962-5,157,179 | - | C1H2g13038 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C2H2g27059 | 2:5,157,812-5,161,199 | - | C1H2g25618 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| C2H2g02539 | 2:5,185,476-5,186,006 | - | C1H2g23514 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C2H2g22913 | 2:5,201,611-5,204,821 | - | C1H2g23712 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C2H2g21450 | 2:5,220,163-5,220,890 | + | C1H2g24067 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C2H2g30620 | 2:5,225,622-5,228,362 | - | C1H2g20496 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C2H2g13782 | 2:5,235,698-5,238,079 | + | C1H2g04540 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C2H2g29179 | 2:5,239,700-5,268,576 | - | C1H2g00291 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |