| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00221 | 4:16,654,068-16,657,405 | - | - | - | - | - | - | Detail |
| C1H4g00621 | 4:16,659,035-16,662,449 | + | C2H4g20464 | - | LOC_Os04g32220 | Os04g0393200 | - | Detail |
| C1H4g11686 | 4:16,672,123-16,672,608 | + | C2H4g13351 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C1H4g20056 | 4:16,673,986-16,676,441 | + | C2H4g20464 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C1H4g08605 | 4:16,680,567-16,684,626 | - | C2H4g11378 | CX4g036058 | LOC_Os04g32270 | Os04g0393300 | - | Detail |
| C1H4g12865 | 4:16,710,219-16,715,569 | + | C2H4g10960 | CX4g034279 | LOC_Os04g32310 | Os04g0393900 | - | Detail |
| C1H4g06922 | 4:16,720,019-16,723,230 | + | C2H4g18193 | CX4g034392 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| C1H4g17845 | 4:16,725,013-16,729,329 | + | C2H4g16524 | CX4g035538 | LOC_Os04g32330 | Os04g0394200 | - | Detail |
| C1H4g05869 | 4:16,729,859-16,737,578 | - | C2H4g25961 | CX4g034536 | LOC_Os04g32340 | Os04g0394300 | - | Detail |
| C1H4g02701 | 4:16,741,767-16,749,994 | - | C2H4g27874 | CX4g036042 | LOC_Os04g32350 | Os04g0394500 | DGS1, RPC4 | Detail |
| C1H4g04290 | 4:16,760,267-16,767,220 | + | C2H4g13468 | CX4g032930 | LOC_Os04g32370 | Os04g0394700 | - | Detail |
| C1H4g22256 | 4:16,783,814-16,788,244 | - | C2H4g07831 | CX4g033841 | LOC_Os04g32460 | Os04g0395600 | - | Detail |
| C1H4g04595 | 4:16,805,450-16,806,705 | - | - | - | - | - | - | Detail |
| C1H4g21629 | 4:16,809,914-16,810,450 | - | C2H4g01216 | CX4g036177 | LOC_Os04g32470 | Os04g0395700 | - | Detail |
| C1H4g00131 | 4:16,823,498-16,827,263 | + | C2H4g05465 | CX4g033931 | LOC_Os04g32480 | Os04g0395800 | - | Detail |
| C1H4g20584 | 4:16,829,647-16,835,344 | - | C2H4g15362 | CX4g035337 | LOC_Os04g32490 | Os04g0395900 | - | Detail |
| C1H4g10776 | 4:16,899,462-16,911,243 | + | C2H4g27206 | CX4g031625 | LOC_Os04g32510 | Os04g0396500 | LAX2 | Detail |
| C1H4g30291 | 4:16,928,629-16,932,405 | + | C2H4g12362 | CX4g032605 | LOC_Os04g32540 | Os04g0396800 | - | Detail |
| C1H4g11763 | 4:16,937,937-16,939,103 | + | C2H4g11756 | CX4g036117 | LOC_Os04g32550 | Os04g0397000 | - | Detail |
| C1H4g04793 | 4:16,940,329-16,946,897 | - | C2H4g07574 | CX4g034837 | LOC_Os04g32560 | Os04g0397100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g14338 | 5:23,868,931-23,876,697 | - | C1H5g07868 | CX5g037010 | LOC_Os05g49590 | Os05g0571000 | - | Detail |
| C2H5g15890 | 5:23,882,860-23,884,392 | + | C1H5g09249 | CX5g038156 | LOC_Os05g49610 | Os05g0571100 | - | Detail |
| C2H5g15353 | 5:23,890,748-23,891,029 | + | C1H5g06315 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g11276 | 5:23,891,281-23,891,796 | + | C1H5g19986 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g07321 | 5:23,892,025-23,894,896 | - | C1H5g04002 | CX5g039084 | LOC_Os05g49640 | - | - | Detail |
| C2H5g09536 | 5:23,895,915-23,897,740 | - | C1H5g05630 | CX5g039473 | LOC_Os05g49650 | Os05g0571400 | - | Detail |
| C2H5g14116 | 5:23,898,619-23,902,218 | - | C1H5g23505 | CX5g037409 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| C2H5g01741 | 5:23,905,975-23,906,802 | - | C1H5g31650 | CX5g038122 | LOC_Os05g49700 | Os05g0572000 | OsRPH1 | Detail |
| C2H5g01004 | 5:23,915,973-23,918,002 | - | C1H5g09233 | CX5g040343 | LOC_Os05g49730 | Os05g0572700 | - | Detail |
| C2H5g20444 | 5:23,925,945-23,928,008 | - | C1H5g26987 | CX5g037759 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| C2H5g08690 | 5:23,929,370-23,932,564 | - | C1H5g12531 | CX5g039397 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| C2H5g17652 | 5:23,935,405-23,938,609 | + | C1H5g06006 | CX5g036976 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| C2H5g07346 | 5:23,938,828-23,945,135 | - | C1H5g18333 | CX5g036857 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| C2H5g13745 | 5:23,965,402-23,968,553 | + | C1H5g30361 | CX5g039933 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| C2H5g25143 | 5:23,970,861-23,971,274 | - | C1H5g18248 | CX5g040236 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| C2H5g09568 | 5:23,973,438-23,976,872 | - | C1H5g00854 | CX5g037555 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| C2H5g06151 | 5:23,979,142-23,980,140 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g07066 | 5:23,981,387-23,983,427 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g06386 | 5:23,983,736-23,987,904 | - | C1H5g10056 | CX5g037660 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| C2H5g04324 | 5:23,991,609-23,992,927 | + | C1H5g18130 | CX5g038298 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |