| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02661 | 4:16,013,372-16,019,034 | - | C2H4g01312 | CX4g031408 | LOC_Os04g31170 | Os04g0380800 | - | Detail |
| C1H4g01385 | 4:16,032,701-16,042,093 | - | C2H4g29753 | CX4g033271 | LOC_Os04g31190 | Os04g0381000 | - | Detail |
| C1H4g29700 | 4:16,048,099-16,053,840 | + | C2H4g17810 | CX4g035253 | LOC_Os04g31210 | Os04g0381100 | - | Detail |
| C1H4g17691 | 4:16,054,709-16,057,828 | + | C2H4g00277 | CX4g035237 | LOC_Os04g31240 | Os04g0381400 | - | Detail |
| C1H4g16213 | 4:16,060,070-16,060,468 | + | C2H4g17534 | CX4g031369 | LOC_Os04g31250 | Os04g0381500 | - | Detail |
| C1H4g09513 | 4:16,064,045-16,069,344 | + | C2H4g29102 | CX4g035133 | LOC_Os04g31270 | Os04g0381600 | - | Detail |
| C1H4g27606 | 4:16,082,106-16,084,132 | + | C2H4g16108 | CX4g034109 | LOC_Os04g31290 | Os04g0381700 | OsbHLH156 | Detail |
| C1H4g16826 | 4:16,092,463-16,094,028 | + | C2H4g25229 | CX4g032314 | LOC_Os04g31320 | Os04g0382100 | - | Detail |
| C1H4g06772 | 4:16,097,094-16,098,627 | - | - | - | - | Os04g0382250 | - | Detail |
| C1H4g24626 | 4:16,098,841-16,099,580 | - | - | - | - | - | - | Detail |
| C1H4g08250 | 4:16,102,777-16,107,833 | - | C2H4g08291 | CX4g033731 | LOC_Os04g31340 | Os04g0382300 | - | Detail |
| C1H4g23640 | 4:16,121,861-16,127,345 | + | C2H4g21907 | CX4g033213 | LOC_Os04g31390 | Os04g0382700 | - | Detail |
| C1H4g29507 | 4:16,133,426-16,136,822 | + | C2H4g11523 | CX4g031504 | LOC_Os04g31400 | Os04g0382800 | - | Detail |
| C1H4g27689 | 4:16,256,281-16,257,659 | - | C2H4g25485 | CX4g031500 | LOC_Os04g31610 | Os04g0385600 | - | Detail |
| C1H4g28157 | 4:16,321,603-16,322,148 | + | C2H4g09951 | CX4g036232 | LOC_Os04g31670 | Os04g0386300 | - | Detail |
| C1H4g01776 | 4:16,331,665-16,334,165 | + | C2H4g19704 | CX4g034133 | LOC_Os04g31690 | Os04g0386500 | - | Detail |
| C1H4g26815 | 4:16,334,895-16,339,950 | - | C2H4g09573 | CX4g031487 | LOC_Os04g31700 | Os04g0386600 | - | Detail |
| C1H4g21589 | 4:16,341,029-16,341,943 | + | C2H4g14766 | CX4g036353 | LOC_Os04g31710 | Os04g0386700 | - | Detail |
| C1H4g05500 | 4:16,344,502-16,345,259 | - | C2H4g24192 | CX4g032722 | LOC_Os04g31730 | Os04g0386900 | - | Detail |
| C1H4g13044 | 4:16,365,676-16,365,888 | + | C2H4g21209 | CX4g034462 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g11450 | 7:7,124,958-7,125,581 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14660 | Os07g0250501 | - | Detail |
| C2H7g23778 | 7:7,137,781-7,138,464 | - | C1H7g21292 | CX7g048720 | LOC_Os07g14700 | Os07g0250900 | - | Detail |
| C2H7g28203 | 7:7,149,078-7,149,719 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14740 | Os07g0250501 | - | Detail |
| C2H7g28553 | 7:7,186,019-7,186,360 | - | - | CX7g048902 | LOC_Os07g14750 | Os07g0251301 | - | Detail |
| C2H7g15996 | 7:7,200,306-7,203,510 | + | C1H7g18810 | CX7g048268 | LOC_Os07g14820 | Os07g0251900 | - | Detail |
| C2H7g05679 | 7:7,207,094-7,212,290 | + | C1H7g10746 | CX7g046435 | LOC_Os07g14830 | Os07g0252000 | - | Detail |
| C2H7g17134 | 7:7,223,715-7,229,463 | + | C1H7g26817 | CX7g049667 | LOC_Os07g14850 | Os07g0252400 | - | Detail |
| C2H7g23750 | 7:7,246,226-7,246,788 | + | C1H7g10089 | CX7g048231 | LOC_Os07g14890 | Os07g0252800 | - | Detail |
| C2H7g19402 | 7:7,250,072-7,252,482 | + | C1H7g26508 | CX7g050168 | LOC_Os07g14910 | Os07g0253000 | - | Detail |
| C2H7g05963 | 7:7,264,734-7,267,208 | + | C1H7g01742 | CX7g049155 | LOC_Os07g15100 | Os11g0105750 | - | Detail |
| C2H7g08804 | 7:7,268,652-7,270,616 | + | C1H7g17603 | - | - | - | - | Detail |
| C2H7g14446 | 7:7,371,109-7,372,779 | - | C1H7g31283 | CX7g047859 | LOC_Os07g15230 | Os07g0255900 | - | Detail |
| C2H7g28428 | 7:7,384,135-7,386,590 | + | C1H7g31340 | CX7g047486 | LOC_Os07g15270 | Os07g0256200 | - | Detail |
| C2H7g03084 | 7:7,387,642-7,390,675 | - | C1H7g04567 | CX7g046073 | LOC_Os07g15280 | Os07g0256300 | - | Detail |
| C2H7g00027 | 7:7,393,258-7,394,158 | + | C1H7g10057 | - | - | - | - | Detail |
| C2H7g14105 | 7:7,397,943-7,399,796 | + | C1H7g05073 | CX7g049409 | LOC_Os07g15320 | Os07g0256700 | - | Detail |
| C2H7g16317 | 7:7,428,225-7,435,578 | - | C1H7g15620 | CX7g047655 | LOC_Os07g15370 | Os07g0257200 | NRAMP5, OsNRAMP5, OsNramp5 | Detail |
| C2H7g08787 | 7:7,441,684-7,444,000 | - | - | - | - | - | - | Detail |
| C2H7g21797 | 7:7,460,714-7,465,665 | + | C1H7g04435 | CX7g050324 | LOC_Os07g15460 | Os07g0258400 | NRAMP1, OsNramp1, OsNRAMP1 | Detail |
| C2H7g24866 | 7:7,471,502-7,474,421 | + | C1H7g23800 | CX7g047521 | LOC_Os07g15490 | Os07g0258700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |