| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12135 | 4:15,716,293-15,717,732 | + | C2H4g13161 | CX4g033855 | LOC_Os04g30750 | Os04g0376200 | - | Detail |
| C1H4g11616 | 4:15,719,731-15,724,399 | - | C2H4g28902 | CX4g034926 | LOC_Os04g30760 | Os04g0376300 | OsPLS4 | Detail |
| C1H4g04380 | 4:15,729,923-15,731,437 | - | C2H4g22640 | CX4g034222 | LOC_Os04g30770 | Os04g0376400 | - | Detail |
| C1H4g04365 | 4:15,738,903-15,743,317 | - | C2H4g16376 | CX4g036230 | LOC_Os04g30780 | Os04g0376500 | - | Detail |
| C1H4g01599 | 4:15,745,235-15,747,694 | - | C2H4g13123 | CX4g033110 | LOC_Os04g30790 | Os04g0376600 | - | Detail |
| C1H4g10257 | 4:15,751,901-15,755,187 | - | C2H4g22799 | CX11g013645 | LOC_Os04g30800 | Os04g0376700 | - | Detail |
| C1H4g19859 | 4:15,772,605-15,776,447 | + | C2H4g24581 | CX4g034805 | LOC_Os04g30880 | Os04g0377600 | - | Detail |
| C1H4g31829 | 4:15,777,330-15,781,663 | - | C2H4g01775 | - | - | - | - | Detail |
| C1H4g06621 | 4:15,784,774-15,789,597 | + | C2H4g24005 | CX4g034126 | LOC_Os04g30910 | Os04g0378200 | - | Detail |
| C1H4g07551 | 4:15,801,277-15,805,083 | + | C2H4g13399 | CX4g031629 | LOC_Os04g30930 | Os04g0378575 | - | Detail |
| C1H4g12695 | 4:15,828,886-15,838,820 | + | C2H4g06070 | CX4g033147 | LOC_Os04g31000 | Os04g0379300 | - | Detail |
| C1H4g10583 | 4:15,843,566-15,845,420 | - | C2H4g14670 | CX4g036303 | LOC_Os04g31010 | Os04g0379400 | - | Detail |
| C1H4g25398 | 4:15,846,813-15,850,977 | + | C2H4g17952 | CX4g033620 | LOC_Os04g31020 | - | - | Detail |
| C1H4g14850 | 4:15,857,314-15,858,811 | + | C2H4g21030 | CX4g036222 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| C1H4g24339 | 4:15,859,429-15,862,134 | - | C2H4g09470 | CX4g032400 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| C1H4g13382 | 4:15,864,675-15,869,263 | + | C2H4g26874 | CX4g033149 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| C1H4g26878 | 4:15,870,495-15,872,900 | - | C2H4g26825 | CX4g036511 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| C1H4g30575 | 4:15,902,606-15,904,937 | + | C2H4g19037 | CX4g035040 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| C1H4g22670 | 4:15,906,753-15,908,117 | - | C2H4g14356 | CX4g035366 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| C1H4g10860 | 4:15,934,724-15,937,828 | - | C2H4g11769 | CX4g033366 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25383 | 1:6,016,659-6,017,612 | - | C1H1g19662 | CX1g004809 | LOC_Os01g12400 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g06877 | 1:6,018,080-6,018,949 | - | C1H1g02057 | CX1g004809 | LOC_Os01g12410 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g00939 | 1:6,023,568-6,028,266 | - | C1H1g04603 | - | - | - | - | Detail |
| C2H1g15856 | 1:6,029,178-6,031,628 | + | C1H1g19662 | CX1g003236 | LOC_Os01g12420 | Os01g0223900 | SDRLK-47 | Detail |
| C2H1g29853 | 1:6,033,552-6,035,954 | - | C1H1g19662 | CX1g002105 | LOC_Os01g12430 | Os01g0224000 | SDRLK-48 | Detail |
| C2H1g22176 | 1:6,055,467-6,056,612 | + | C1H1g08851 | CX1g003851 | LOC_Os01g12440 | Os01g0224100 | - | Detail |
| C2H1g17446 | 1:6,073,162-6,075,817 | - | C1H1g10595 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C2H1g06705 | 1:6,076,291-6,077,687 | + | C1H1g28759 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C2H1g14688 | 1:6,079,484-6,082,353 | + | C1H1g07004 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C2H1g11914 | 1:6,084,157-6,086,154 | - | C1H1g12177 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C2H1g03625 | 1:6,101,830-6,105,532 | + | C1H1g07815 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C2H1g01358 | 1:6,126,666-6,129,350 | - | C1H1g11599 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C2H1g06869 | 1:6,136,314-6,143,339 | + | C1H1g06137 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C2H1g08071 | 1:6,144,690-6,151,484 | + | C1H1g01658 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C2H1g21338 | 1:6,151,761-6,156,636 | + | C1H1g10876 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C2H1g20462 | 1:6,157,508-6,159,650 | - | C1H1g09440 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C2H1g08221 | 1:6,160,616-6,162,617 | - | C1H1g18546 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C2H1g14460 | 1:6,169,478-6,169,933 | - | C1H1g27681 | CX1g004401 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| C2H1g14647 | 1:6,189,662-6,190,985 | - | C1H1g11055 | CX1g003331 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| C2H1g27972 | 1:6,195,228-6,195,593 | - | C1H11g06426 | CX1g002909 | - | Os11g0702600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |