| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24456 | 4:15,350,612-15,355,045 | + | - | - | - | Os10g0428200 | - | Detail |
| C1H4g03298 | 4:15,359,042-15,360,166 | - | - | - | - | - | - | Detail |
| C1H4g24659 | 4:15,361,887-15,362,761 | - | - | - | - | - | - | Detail |
| C1H4g20870 | 4:15,442,918-15,443,955 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30160 | Os04g0370100 | - | Detail |
| C1H4g27310 | 4:15,444,139-15,445,422 | - | C2H4g11929 | - | - | - | - | Detail |
| C1H4g13550 | 4:15,457,825-15,458,796 | - | C2H4g27695 | CX4g033563 | LOC_Os04g30270 | Os04g0371200 | - | Detail |
| C1H4g00940 | 4:15,466,052-15,468,169 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30280 | Os04g0368000 | - | Detail |
| C1H4g15913 | 4:15,578,726-15,581,968 | + | C2H4g02498 | CX4g031772 | LOC_Os04g30420 | Os04g0372700 | - | Detail |
| C1H4g23526 | 4:15,582,279-15,587,129 | - | C2H4g10957 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C1H4g19886 | 4:15,593,804-15,594,498 | + | C2H4g23915 | - | - | - | - | Detail |
| C1H4g17345 | 4:15,595,574-15,598,445 | + | C2H4g15991 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C1H4g15354 | 4:15,602,056-15,603,672 | + | C2H4g25729 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C1H4g23534 | 4:15,616,897-15,620,151 | + | C2H4g27653 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C1H4g04442 | 4:15,660,626-15,663,910 | + | C2H4g16321 | CX4g032818 | LOC_Os04g30540 | Os04g0374000 | - | Detail |
| C1H4g28100 | 4:15,684,372-15,689,384 | - | - | - | - | - | - | Detail |
| C1H4g09226 | 4:15,692,550-15,695,774 | + | C2H4g25498 | CX4g032818 | LOC_Os04g30610 | Os04g0374000 | - | Detail |
| C1H4g09945 | 4:15,698,998-15,703,545 | - | C2H4g15638 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C1H4g09093 | 4:15,706,954-15,708,660 | - | C2H4g24509 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C1H4g14613 | 4:15,709,368-15,712,980 | - | C2H4g23366 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C1H4g11665 | 4:15,715,342-15,716,102 | + | C2H4g02514 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |