| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08969 | 4:13,218,956-13,221,228 | + | C2H4g25025 | CX4g036238 | LOC_Os04g27990 | Os04g0346900 | - | Detail |
| C1H4g15107 | 4:13,225,358-13,232,659 | + | C2H4g18236 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C1H4g05294 | 4:13,237,937-13,242,997 | - | - | - | - | - | - | Detail |
| C1H4g03410 | 4:13,478,427-13,482,579 | - | C2H6g18608 | CX6g044432 | - | Os12g0632401 | - | Detail |
| C1H4g19418 | 4:13,536,308-13,543,244 | + | C2H4g16562 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C1H4g22332 | 4:13,551,105-13,556,761 | + | C2H4g25578 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C1H4g13797 | 4:13,559,425-13,564,556 | + | C2H4g20901 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C1H4g24314 | 4:13,563,743-13,566,873 | - | C2H4g08837 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C1H4g16463 | 4:13,574,904-13,582,287 | + | C2H4g13837 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C1H4g18035 | 4:13,586,454-13,589,500 | - | C2H4g14798 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C1H4g07136 | 4:13,598,759-13,601,214 | + | C2H4g14319 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C1H4g27011 | 4:13,610,302-13,613,546 | + | C2H4g18470 | - | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C1H4g23299 | 4:13,626,130-13,629,312 | + | C2H4g29280 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C1H4g18144 | 4:13,635,805-13,639,280 | - | C2H4g00376 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C1H4g07697 | 4:13,641,848-13,643,962 | - | C2H4g26754 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| C1H4g08997 | 4:13,661,222-13,666,019 | - | C2H4g11001 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C1H4g05397 | 4:13,678,190-13,680,673 | + | C2H4g17175 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C1H4g22441 | 4:13,698,927-13,706,233 | + | C2H4g23045 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C1H4g22936 | 4:13,724,316-13,727,239 | - | C2H4g11650 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C1H4g19111 | 4:13,731,769-13,732,047 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17646 | 1:38,129,980-38,130,688 | + | C1H1g07020 | CX1g006503 | LOC_Os01g74340 | Os01g0974701 | - | Detail |
| C2H1g29036 | 1:38,131,908-38,133,210 | - | C1H1g24870 | CX1g003882 | LOC_Os01g74350 | Os01g0974800 | - | Detail |
| C2H1g11687 | 1:38,134,806-38,135,098 | - | C1H1g25105 | CX1g003190 | - | - | - | Detail |
| C2H1g23261 | 1:38,136,384-38,137,536 | - | C1H1g11140 | CX1g005588 | LOC_Os01g74370 | Os01g0975000 | - | Detail |
| C2H1g00046 | 1:38,141,734-38,142,757 | + | C1H1g20453 | CX1g004945 | LOC_Os01g74410 | Os01g0975300 | - | Detail |
| C2H1g28574 | 1:38,146,473-38,147,620 | + | C1H1g23264 | - | - | - | - | Detail |
| C2H1g00932 | 1:38,147,827-38,148,462 | + | C1H1g23264 | CX1g004255 | LOC_Os01g58160 | - | - | Detail |
| C2H1g01068 | 1:38,154,973-38,155,602 | + | C1H1g08219 | CX1g003699 | LOC_Os01g74440 | Os01g0975800 | MADS79 | Detail |
| C2H1g19458 | 1:38,158,726-38,159,560 | - | C1H1g02174 | CX1g006077 | LOC_Os01g74450 | Os01g0975900 | - | Detail |
| C2H1g03008 | 1:38,162,678-38,168,169 | - | C1H1g10248 | CX1g006488 | LOC_Os01g74460 | Os01g0976000 | MON1 | Detail |
| C2H1g29806 | 1:38,171,025-38,179,061 | - | C1H1g23123 | CX1g006587 | LOC_Os01g74470 | Os01g0976100 | - | Detail |
| C2H1g05558 | 1:38,185,766-38,186,392 | + | C1H1g04013 | CX1g003039 | LOC_Os01g74490 | Os01g0976300 | - | Detail |
| C2H1g15344 | 1:38,187,566-38,192,165 | + | C1H1g31465 | CX1g004080 | LOC_Os01g74500 | Os01g0976450 | - | Detail |
| C2H1g17772 | 1:38,192,817-38,196,408 | + | C1H1g00111 | CX1g003446 | LOC_Os01g74510 | Os01g0976500 | - | Detail |
| C2H1g05896 | 1:38,198,338-38,201,659 | - | C1H1g31006 | CX1g003902 | LOC_Os01g74520 | Os01g0976600 | - | Detail |
| C2H1g11672 | 1:38,203,586-38,206,890 | - | C1H1g13528 | CX1g001345 | LOC_Os01g74530 | Os01g0976700 | - | Detail |
| C2H1g08596 | 1:38,208,998-38,209,508 | - | C1H1g28719 | CX1g005337 | LOC_Os01g74540 | Os01g0976800 | GATA10 | Detail |
| C2H1g27561 | 1:38,211,836-38,215,585 | - | C1H1g02636 | CX1g006826 | LOC_Os01g74550 | Os01g0976900 | - | Detail |
| C2H1g13292 | 1:38,217,756-38,225,374 | + | C1H1g05726 | CX1g000198 | LOC_Os01g74570 | Os01g0977200 | - | Detail |
| C2H1g30278 | 1:38,234,078-38,246,849 | - | C1H1g07474 | CX1g002702 | LOC_Os01g74610 | Os01g0977600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |