| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03562 | 4:12,928,133-12,928,405 | + | C2H4g20021 | - | - | Os04g0341100 | - | Detail |
| C1H4g19050 | 4:12,935,121-12,944,840 | - | C2H4g09454 | CX4g033674 | LOC_Os04g27340 | Os04g0340300 | OsTPS19 | Detail |
| C1H4g20792 | 4:12,968,531-12,971,065 | - | C2H4g13731 | CX4g034457 | LOC_Os04g27470 | Os04g0345400 | - | Detail |
| C1H4g05931 | 4:12,985,331-12,987,899 | - | C2H4g30131 | CX4g033401 | LOC_Os04g27430 | Os04g0342100 | OsSTPS2 | Detail |
| C1H4g04953 | 4:12,990,304-12,993,326 | - | C2H4g30131 | CX4g035836 | LOC_Os04g27430 | Os04g0342100 | OsSTPS2 | Detail |
| C1H4g10592 | 4:13,031,164-13,036,953 | - | C2H4g01920 | CX4g034334 | LOC_Os04g27540 | Os04g0345400 | - | Detail |
| C1H4g14729 | 4:13,081,514-13,083,682 | - | C2H4g22506 | CX4g034494 | LOC_Os04g27720 | Os04g0344100 | - | Detail |
| C1H4g01231 | 4:13,112,594-13,112,908 | - | C2H4g16931 | - | - | - | - | Detail |
| C1H4g17656 | 4:13,115,785-13,119,290 | - | C2H4g16931 | CX4g033401 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| C1H4g17126 | 4:13,128,022-13,130,078 | + | C2H4g12683 | CX4g036139 | LOC_Os11g08800 | - | - | Detail |
| C1H4g21918 | 4:13,135,371-13,139,973 | + | C2H4g23322 | CX4g036067 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| C1H4g23107 | 4:13,141,340-13,144,568 | - | - | CX4g033963 | - | - | - | Detail |
| C1H4g22755 | 4:13,144,706-13,146,638 | - | C2H4g27481 | - | - | - | - | Detail |
| C1H4g11276 | 4:13,155,482-13,159,609 | + | C2H4g05861 | CX4g034459 | LOC_Os04g27830 | Os04g0345800 | - | Detail |
| C1H4g11725 | 4:13,164,153-13,171,655 | + | C2H4g12493 | CX4g034468 | LOC_Os04g27850 | Os04g0346000 | - | Detail |
| C1H4g07589 | 4:13,176,401-13,176,930 | - | C2H4g15688 | CX4g032851 | - | - | - | Detail |
| C1H4g08073 | 4:13,180,391-13,181,755 | + | C2H4g22024 | CX4g034059 | LOC_Os04g27860 | Os04g0346100 | - | Detail |
| C1H4g22890 | 4:13,188,872-13,190,869 | + | C2H4g10199 | CX4g036065 | - | Os04g0346800 | - | Detail |
| C1H4g23098 | 4:13,198,680-13,202,442 | - | C2H4g07726 | CX4g036207 | LOC_Os04g27960 | Os04g0346900 | - | Detail |
| C1H4g05778 | 4:13,207,788-13,209,105 | - | C2H4g06173 | CX4g036626 | LOC_Os04g27980 | Os04g0347200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g09394 | 5:17,248,766-17,254,030 | - | C1H5g20306 | CX5g037350 | LOC_Os05g34550 | Os05g0418100 | - | Detail |
| C2H5g30520 | 5:17,263,642-17,264,457 | - | C1H5g09296 | CX5g038596 | LOC_Os05g34570 | Os05g0418500 | - | Detail |
| C2H5g00424 | 5:17,272,098-17,274,428 | - | C1H5g19185 | CX5g037191 | LOC_Os05g34600 | Os05g0418800 | - | Detail |
| C2H5g04546 | 5:17,284,937-17,288,318 | - | C1H5g01087 | CX5g037281 | LOC_Os05g34630 | Os05g0419000 | - | Detail |
| C2H5g19079 | 5:17,291,019-17,295,583 | + | C1H5g10579 | CX5g038692 | LOC_Os05g34640 | Os05g0419100 | OsAL5 | Detail |
| C2H5g20412 | 5:17,297,332-17,301,485 | - | C1H5g24431 | CX5g040441 | LOC_Os05g34650 | Os05g0419200 | - | Detail |
| C2H5g19507 | 5:17,318,923-17,322,710 | - | C1H5g12812 | CX5g038818 | LOC_Os05g34670 | Os05g0419500 | - | Detail |
| C2H5g29392 | 5:17,332,143-17,333,443 | - | C1H5g20774 | CX5g040586 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| C2H5g16335 | 5:17,336,406-17,340,722 | + | C1H5g21437 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C2H5g10847 | 5:17,347,553-17,350,226 | + | C1H5g23153 | CX5g039353 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| C2H5g17369 | 5:17,358,066-17,358,905 | - | C1H5g19351 | CX5g037413 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| C2H5g20050 | 5:17,372,686-17,378,899 | + | C1H5g00420 | CX5g040333 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| C2H5g06562 | 5:17,379,832-17,382,325 | + | C1H5g20696 | CX5g039680 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| C2H5g12654 | 5:17,387,621-17,393,916 | + | C1H1g14405 | CX5g038496 | LOC_Os05g34780 | Os05g0420800 | PMR | Detail |
| C2H5g20791 | 5:17,399,471-17,400,040 | + | C1H5g14092 | CX5g037173 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| C2H5g00178 | 5:17,403,992-17,409,514 | + | C1H5g19992 | CX5g038029 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| C2H5g17032 | 5:17,418,841-17,420,452 | + | C1H5g29371 | CX5g039797 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| C2H5g09186 | 5:17,434,321-17,440,621 | - | C1H5g12253 | CX5g038815 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| C2H5g24092 | 5:17,463,914-17,468,305 | - | C1H5g11306 | CX5g038799 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| C2H5g03824 | 5:17,471,206-17,478,606 | - | C1H5g25911 | CX5g038432 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |