| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03180 | 4:12,666,438-12,673,542 | - | C2H4g22692 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C1H4g28418 | 4:12,676,271-12,677,127 | - | C2H4g22692 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C1H4g14114 | 4:12,707,832-12,717,022 | - | C2H4g17804 | CX4g033284 | LOC_Os04g26834 | Os04g0337000 | - | Detail |
| C1H4g19182 | 4:12,728,203-12,743,292 | + | C2H4g18381 | CX4g031766 | LOC_Os04g26850 | Os04g0337300 | - | Detail |
| C1H4g07832 | 4:12,752,693-12,757,246 | + | C2H4g01340 | CX4g036366 | LOC_Os04g26870 | Os04g0337500 | - | Detail |
| C1H4g19562 | 4:12,761,414-12,761,686 | + | C2H4g25762 | CX4g036366 | LOC_Os04g27060 | Os04g0337800 | - | Detail |
| C1H4g14004 | 4:12,763,824-12,766,999 | + | C2H4g03837 | CX4g035559 | LOC_Os04g26910 | Os04g0338000 | - | Detail |
| C1H4g28393 | 4:12,793,707-12,794,396 | + | C2H4g15649 | CX4g035559 | LOC_Os04g26920 | Os04g0338000 | - | Detail |
| C1H4g23322 | 4:12,819,041-12,820,820 | + | C2H4g14050 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C1H4g29111 | 4:12,822,642-12,822,977 | + | C2H4g17594 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C1H4g09628 | 4:12,823,706-12,824,008 | + | C2H4g16024 | CX4g036012 | LOC_Os04g26960 | Os04g0344400 | - | Detail |
| C1H4g24890 | 4:12,835,579-12,838,975 | - | C2H4g14050 | CX4g031945 | LOC_Os04g26980 | Os04g0341500 | OsTPS20 | Detail |
| C1H4g07892 | 4:12,860,532-12,860,954 | + | C2H4g12078 | - | - | - | - | Detail |
| C1H4g13431 | 4:12,863,657-12,865,308 | + | - | - | - | - | - | Detail |
| C1H4g29227 | 4:12,868,196-12,871,257 | + | C2H4g17478 | CX4g035619 | LOC_Os04g27020 | Os04g0480600 | - | Detail |
| C1H4g26057 | 4:12,884,488-12,888,359 | + | C2H4g26112 | CX4g032815 | LOC_Os04g27060 | Os04g0339400 | OsAKR1 | Detail |
| C1H4g31520 | 4:12,890,546-12,890,845 | - | C2H4g17594 | CX4g031945 | LOC_Os04g27070 | Os04g0344400 | - | Detail |
| C1H4g28783 | 4:12,892,427-12,894,337 | - | C2H4g17594 | CX4g031945 | LOC_Os04g27070 | Os04g0344100 | - | Detail |
| C1H4g08287 | 4:12,918,016-12,918,415 | - | C2H4g19529 | CX4g033901 | LOC_Os03g15570 | Os04g0339800 | - | Detail |
| C1H4g16337 | 4:12,918,971-12,923,205 | - | C2H4g19529 | CX4g033901 | LOC_Os04g27096 | Os04g0340100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16051 | 2:23,492,372-23,495,515 | - | C1H2g19763 | CX2g024311 | LOC_Os02g41890 | Os02g0629400 | OsPSKR1 | Detail |
| C2H2g04434 | 2:23,510,511-23,510,887 | + | C1H2g07403 | CX2g024249 | LOC_Os02g41904 | Os02g0629800 | CAL1, OsDEF7 | Detail |
| C2H2g27876 | 2:23,511,988-23,513,196 | + | C1H2g07403 | CX2g024249 | LOC_Os02g41910 | Os02g0630000 | - | Detail |
| C2H2g04734 | 2:23,513,894-23,514,597 | - | C1H2g06769 | - | LOC_Os02g41920 | Os02g0630100 | - | Detail |
| C2H2g01558 | 2:23,514,635-23,514,862 | - | C1H2g17432 | - | LOC_Os02g41920 | Os02g0630100 | - | Detail |
| C2H2g08486 | 2:23,515,800-23,516,912 | + | C1H2g18657 | CX2g021065 | LOC_Os02g41930 | Os02g0630000 | - | Detail |
| C2H2g02866 | 2:23,517,314-23,517,934 | - | - | CX2g019866 | LOC_Os02g41940 | Os02g0630250 | - | Detail |
| C2H2g23913 | 2:23,522,549-23,523,248 | - | C1H2g25377 | CX2g023936 | LOC_Os02g41954 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H2g16265 | 2:23,524,298-23,524,950 | - | C1H2g25377 | CX2g023936 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| C2H2g26818 | 2:23,526,490-23,527,475 | - | C1H2g31811 | CX2g023936 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| C2H2g20874 | 2:23,555,745-23,556,230 | + | C1H2g28250 | CX2g024050 | LOC_Os02g41980 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g03348 | 2:23,558,844-23,562,789 | + | C1H2g23091 | CX2g023391 | LOC_Os02g41990 | Os02g0631000 | - | Detail |
| C2H2g04153 | 2:23,566,722-23,567,855 | + | C1H2g14795 | CX2g021046 | LOC_Os02g42000 | Os02g0631100 | - | Detail |
| C2H2g07998 | 2:23,569,194-23,576,069 | - | C1H2g15067 | CX2g021591 | LOC_Os02g42020 | Os02g0631200 | - | Detail |
| C2H2g11029 | 2:23,589,296-23,600,534 | - | C1H2g17736 | CX2g020065 | LOC_Os02g42040 | Os02g0631500 | - | Detail |
| C2H2g14005 | 2:23,601,920-23,602,788 | - | C1H2g09662 | CX2g020722 | LOC_Os02g42060 | Os02g0631700 | RR11, OsRR11, Rra8, OsRRA8 | Detail |
| C2H2g25237 | 2:23,607,196-23,607,504 | - | C1H2g15956 | - | - | - | - | Detail |
| C2H2g02788 | 2:23,608,232-23,608,917 | - | C1H2g01302 | CX2g019329 | - | - | - | Detail |
| C2H2g13888 | 2:23,613,014-23,617,914 | + | C1H2g09889 | CX2g024149 | LOC_Os02g42110 | Os02g0632100 | OsWee1 | Detail |
| C2H2g12352 | 2:23,619,022-23,619,384 | + | C1H2g28960 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |