| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03180 | 4:12,666,438-12,673,542 | - | C2H4g22692 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C1H4g28418 | 4:12,676,271-12,677,127 | - | C2H4g22692 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C1H4g14114 | 4:12,707,832-12,717,022 | - | C2H4g17804 | CX4g033284 | LOC_Os04g26834 | Os04g0337000 | - | Detail |
| C1H4g19182 | 4:12,728,203-12,743,292 | + | C2H4g18381 | CX4g031766 | LOC_Os04g26850 | Os04g0337300 | - | Detail |
| C1H4g07832 | 4:12,752,693-12,757,246 | + | C2H4g01340 | CX4g036366 | LOC_Os04g26870 | Os04g0337500 | - | Detail |
| C1H4g19562 | 4:12,761,414-12,761,686 | + | C2H4g25762 | CX4g036366 | LOC_Os04g27060 | Os04g0337800 | - | Detail |
| C1H4g14004 | 4:12,763,824-12,766,999 | + | C2H4g03837 | CX4g035559 | LOC_Os04g26910 | Os04g0338000 | - | Detail |
| C1H4g28393 | 4:12,793,707-12,794,396 | + | C2H4g15649 | CX4g035559 | LOC_Os04g26920 | Os04g0338000 | - | Detail |
| C1H4g23322 | 4:12,819,041-12,820,820 | + | C2H4g14050 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C1H4g29111 | 4:12,822,642-12,822,977 | + | C2H4g17594 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C1H4g09628 | 4:12,823,706-12,824,008 | + | C2H4g16024 | CX4g036012 | LOC_Os04g26960 | Os04g0344400 | - | Detail |
| C1H4g24890 | 4:12,835,579-12,838,975 | - | C2H4g14050 | CX4g031945 | LOC_Os04g26980 | Os04g0341500 | OsTPS20 | Detail |
| C1H4g07892 | 4:12,860,532-12,860,954 | + | C2H4g12078 | - | - | - | - | Detail |
| C1H4g13431 | 4:12,863,657-12,865,308 | + | - | - | - | - | - | Detail |
| C1H4g29227 | 4:12,868,196-12,871,257 | + | C2H4g17478 | CX4g035619 | LOC_Os04g27020 | Os04g0480600 | - | Detail |
| C1H4g26057 | 4:12,884,488-12,888,359 | + | C2H4g26112 | CX4g032815 | LOC_Os04g27060 | Os04g0339400 | OsAKR1 | Detail |
| C1H4g31520 | 4:12,890,546-12,890,845 | - | C2H4g17594 | CX4g031945 | LOC_Os04g27070 | Os04g0344400 | - | Detail |
| C1H4g28783 | 4:12,892,427-12,894,337 | - | C2H4g17594 | CX4g031945 | LOC_Os04g27070 | Os04g0344100 | - | Detail |
| C1H4g08287 | 4:12,918,016-12,918,415 | - | C2H4g19529 | CX4g033901 | LOC_Os03g15570 | Os04g0339800 | - | Detail |
| C1H4g16337 | 4:12,918,971-12,923,205 | - | C2H4g19529 | CX4g033901 | LOC_Os04g27096 | Os04g0340100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g25703 | 8:20,900,751-20,903,749 | - | C1H8g29712 | CX8g052937 | LOC_Os08g39070 | Os08g0500000 | CSN6 | Detail |
| C2H8g28974 | 8:20,904,398-20,913,620 | + | C1H8g23809 | CX8g052978 | LOC_Os08g39080 | Os08g0500100 | OsPEX5, OsPEX5L, OsPex5pL, DFO2 | Detail |
| C2H8g12356 | 8:20,913,708-20,918,160 | - | C1H8g01766 | CX8g053563 | LOC_Os08g39090 | Os08g0500200 | - | Detail |
| C2H8g17818 | 8:20,918,776-20,923,407 | - | C1H8g05400 | CX8g050896 | LOC_Os08g39100 | Os08g0500300 | - | Detail |
| C2H8g20368 | 8:20,931,796-20,934,991 | + | C1H8g21551 | - | - | - | - | Detail |
| C2H8g05578 | 8:20,935,465-20,937,189 | + | C1H8g02184 | CX8g053603 | LOC_Os08g39130 | Os08g0500600 | - | Detail |
| C2H8g00249 | 8:20,937,742-20,942,198 | - | C1H8g04220 | CX8g053216 | LOC_Os08g39140 | Os08g0500700 | - | Detail |
| C2H8g02855 | 8:20,946,467-20,950,369 | + | C1H8g11855 | CX8g050505 | LOC_Os08g39150 | Os08g0500800 | - | Detail |
| C2H8g01384 | 8:20,950,845-20,952,747 | + | C1H8g07618 | CX8g054816 | LOC_Os08g39160 | Os08g0500900 | - | Detail |
| C2H8g19609 | 8:20,953,996-20,957,342 | - | C1H8g30278 | CX8g051831 | LOC_Os08g39240 | Os08g0378300 | - | Detail |
| C2H8g10441 | 8:20,966,357-20,970,499 | - | C1H8g30278 | CX8g052582 | LOC_Os08g39240 | Os08g0378300 | - | Detail |
| C2H8g17157 | 8:20,974,407-20,979,012 | - | C1H8g29076 | CX8g051811 | LOC_Os08g39210 | Os08g0501500 | - | Detail |
| C2H8g03751 | 8:20,980,535-20,983,428 | + | C1H8g17153 | CX8g051050 | LOC_Os08g39220 | Os08g0501600 | - | Detail |
| C2H8g30060 | 8:20,987,673-20,994,431 | + | C1H8g30278 | CX8g051831 | LOC_Os08g39240 | Os08g0501088 | - | Detail |
| C2H8g12308 | 8:21,010,664-21,019,202 | - | C1H8g03403 | CX8g054560 | LOC_Os08g39250 | Os08g0502000 | OsEDM2L | Detail |
| C2H8g27725 | 8:21,030,093-21,033,126 | - | C1H8g30176 | CX8g051684 | LOC_Os08g39270 | Os08g0502400 | - | Detail |
| C2H8g14081 | 8:21,038,238-21,038,660 | + | C1H9g25042 | CX8g050457 | LOC_Os08g39290 | Os08g0502600 | - | Detail |
| C2H8g04600 | 8:21,039,087-21,041,843 | - | C1H8g14841 | CX8g050547 | LOC_Os08g39300 | Os08g0502700 | - | Detail |
| C2H8g10886 | 8:21,052,217-21,056,630 | + | C1H8g18375 | CX8g052337 | LOC_Os08g39310 | Os08g0502800 | - | Detail |
| C2H8g01349 | 8:21,057,411-21,058,604 | - | C1H8g26411 | CX8g051784 | LOC_Os08g39320 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |