| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05084 | 4:11,863,255-11,864,445 | + | C2H4g22895 | CX4g035356 | LOC_Os04g24340 | Os04g0308600 | - | Detail |
| C1H4g16845 | 4:11,868,610-11,869,652 | + | - | - | - | - | - | Detail |
| C1H4g01555 | 4:11,957,716-11,958,078 | + | C2H4g26507 | CX4g035129 | LOC_Os04g24510 | Os04g0310400 | - | Detail |
| C1H4g08571 | 4:11,958,811-11,960,363 | + | C2H4g25559 | CX4g033408 | LOC_Os04g24510 | Os04g0310400 | - | Detail |
| C1H4g07065 | 4:11,963,297-11,968,153 | - | C2H4g07407 | - | LOC_Os04g24520 | Os04g0310500 | - | Detail |
| C1H4g23308 | 4:11,972,586-11,973,791 | - | C2H4g29321 | - | - | - | - | Detail |
| C1H4g20048 | 4:11,973,891-11,974,403 | - | C2H4g29321 | - | - | - | - | Detail |
| C1H4g15278 | 4:11,982,485-11,984,643 | - | C2H4g23104 | CX4g035166 | LOC_Os04g24530 | Os04g0310800 | OsACS9, 4CL4, OsACOS12 | Detail |
| C1H4g04617 | 4:11,991,620-12,002,487 | + | C2H4g13485 | CX4g034666 | LOC_Os04g24550 | Os04g0311100 | - | Detail |
| C1H4g30413 | 4:12,008,236-12,010,761 | + | C2H4g02221 | CX4g033212 | LOC_Os04g24600 | Os04g0311400 | - | Detail |
| C1H4g11309 | 4:12,011,002-12,015,044 | - | C2H4g15445 | CX4g032994 | LOC_Os04g24610 | - | - | Detail |
| C1H4g12708 | 4:12,058,821-12,060,161 | + | C2H4g11588 | CX4g033613 | LOC_Os04g24750 | Os04g0312500 | - | Detail |
| C1H4g18588 | 4:12,115,464-12,117,104 | - | - | CX4g032564 | LOC_Os04g24820 | Os04g0313500 | - | Detail |
| C1H4g01572 | 4:12,168,085-12,168,409 | + | - | - | LOC_Os04g24830 | Os04g0324550 | - | Detail |
| C1H4g16494 | 4:12,194,592-12,195,130 | - | C2H4g17738 | CX4g036367 | LOC_Os04g25820 | Os04g0313900 | - | Detail |
| C1H4g00441 | 4:12,197,211-12,198,713 | - | C2H4g21441 | CX4g036367 | LOC_Os04g24850 | Os04g0324100 | - | Detail |
| C1H4g19496 | 4:12,222,324-12,225,162 | - | C2H4g23030 | - | - | - | - | Detail |
| C1H4g08388 | 4:12,225,966-12,226,488 | - | C2H4g00602 | CX4g036087 | LOC_Os04g25740 | Os04g0314500 | - | Detail |
| C1H4g03848 | 4:12,268,051-12,269,435 | + | C2H4g15697 | - | - | - | - | Detail |
| C1H4g11483 | 4:12,289,604-12,291,195 | + | C2H4g29155 | CX4g033259 | LOC_Os04g25140 | Os04g0316800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21818 | 8:21,278,483-21,280,492 | + | C1H8g00918 | CX8g052900 | LOC_Os08g39630 | Os08g0506700 | OsFBH1, POH1 | Detail |
| C2H8g10072 | 8:21,295,505-21,297,031 | + | C1H8g02946 | CX8g053330 | LOC_Os08g39694 | Os08g0507000 | - | Detail |
| C2H8g30284 | 8:21,313,645-21,315,171 | + | C1H8g02946 | CX8g052494 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g26138 | 8:21,322,863-21,324,395 | + | C1H8g02946 | CX8g053518 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g03218 | 8:21,324,619-21,327,496 | - | C1H8g28706 | CX8g053499 | LOC_Os08g39740 | Os08g0508100 | - | Detail |
| C2H8g14917 | 8:21,336,534-21,341,315 | - | C1H8g26764 | CX8g054344 | LOC_Os08g39810 | Os08g0508500 | - | Detail |
| C2H8g11766 | 8:21,345,280-21,347,819 | + | C1H8g11318 | CX8g053265 | LOC_Os08g39820 | Os08g0508600 | - | Detail |
| C2H8g22017 | 8:21,350,208-21,352,058 | + | C1H8g03168 | CX8g054476 | LOC_Os08g39830 | Os08g0508700 | - | Detail |
| C2H8g14861 | 8:21,355,672-21,360,638 | - | C1H8g18312 | CX8g054768 | LOC_Os08g39840 | Os08g0508800 | OsHI-LOX | Detail |
| C2H8g19828 | 8:21,373,139-21,381,558 | + | C1H8g17933 | CX8g050519 | LOC_Os08g39840 | Os08g0509100 | - | Detail |
| C2H8g21670 | 8:21,381,741-21,386,155 | - | C1H8g19400 | CX8g053424 | LOC_Os08g39860 | Os08g0509200 | - | Detail |
| C2H8g14320 | 8:21,395,983-21,401,382 | - | C1H8g14217 | CX8g050462 | LOC_Os08g39870 | Os08g0509400 | - | Detail |
| C2H8g18791 | 8:21,402,713-21,405,780 | + | C1H8g31122 | CX8g052395 | LOC_Os08g39880 | Os08g0509500 | - | Detail |
| C2H8g07989 | 8:21,407,747-21,408,052 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28923 | 8:21,408,776-21,411,165 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28069 | 8:21,431,029-21,431,957 | - | C1H8g16265 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g16182 | 8:21,432,150-21,432,624 | - | C1H8g23320 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g05100 | 8:21,434,040-21,438,479 | + | C1H8g13339 | CX8g051410 | LOC_Os08g39950 | Os08g0510300 | OsHAK26 | Detail |
| C2H8g30189 | 8:21,438,689-21,441,258 | - | C1H8g11932 | CX8g051070 | LOC_Os08g39960 | Os08g0510400 | - | Detail |
| C2H8g03377 | 8:21,442,329-21,445,614 | + | C1H8g17932 | CX8g053229 | LOC_Os08g39970 | Os08g0510500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |