| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05159 | 4:8,378,386-8,381,676 | + | C2H4g09540 | CX4g032998 | LOC_Os04g20230 | Os04g0270200 | - | Detail |
| C1H4g20799 | 4:8,385,105-8,398,032 | - | C2H4g06098 | CX4g035940 | LOC_Os04g20220 | Os04g0270100 | - | Detail |
| C1H4g17577 | 4:8,406,137-8,408,769 | - | C2H4g15448 | CX4g035708 | - | Os04g0269700 | - | Detail |
| C1H4g10534 | 4:8,414,720-8,421,905 | - | C2H4g18468 | CX4g032631 | LOC_Os04g20164 | Os04g0269600 | - | Detail |
| C1H4g18182 | 4:8,431,150-8,437,814 | - | C2H4g29933 | CX4g034751 | LOC_Os04g20070 | Os04g0269100 | - | Detail |
| C1H4g04022 | 4:8,465,932-8,466,645 | - | - | CX4g034479 | LOC_Os04g19960 | Os04g0268700 | - | Detail |
| C1H4g03823 | 4:8,514,749-8,518,336 | + | C2H4g28234 | CX4g032254 | LOC_Os04g19800 | Os04g0267600 | - | Detail |
| C1H4g07957 | 4:8,521,970-8,523,556 | + | - | - | LOC_Os04g19790 | Os04g0267250 | - | Detail |
| C1H4g14102 | 4:8,536,278-8,542,253 | - | C2H4g28498 | CX4g031869 | LOC_Os04g19740 | Os04g0266900 | - | Detail |
| C1H4g17553 | 4:8,556,063-8,559,285 | + | C2H4g11331 | - | - | - | - | Detail |
| C1H4g23732 | 4:8,592,810-8,593,118 | + | C2H4g27229 | CX4g032661 | LOC_Os04g19700 | Os04g0266700 | - | Detail |
| C1H4g19173 | 4:8,593,167-8,593,448 | + | C2H4g12107 | CX4g032792 | - | - | - | Detail |
| C1H4g31855 | 4:8,594,000-8,605,592 | + | C2H4g29825 | CX4g035037 | LOC_Os04g19684 | Os04g0266400 | - | Detail |
| C1H4g19454 | 4:8,665,832-8,667,541 | + | - | - | - | - | - | Detail |
| C1H4g00112 | 4:8,786,839-8,789,151 | - | - | CX4g035773 | LOC_Os04g19140 | Os04g0261400 | - | Detail |
| C1H4g10603 | 4:8,813,833-8,814,144 | - | - | - | - | - | - | Detail |
| C1H4g05526 | 4:8,820,248-8,821,474 | + | - | CX4g036189 | LOC_Os04g18790 | Os04g0258900 | - | Detail |
| C1H4g21940 | 4:8,839,060-8,839,899 | + | C2H4g07429 | CX6g042907 | LOC_Os10g31650 | - | - | Detail |
| C1H4g06177 | 4:8,909,030-8,909,416 | + | C2H4g06793 | CX4g036317 | LOC_Os04g18650 | Os04g0257500 | - | Detail |
| C1H4g05617 | 4:9,056,020-9,056,575 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16390 | 6:3,252,109-3,268,767 | - | C1H6g28905 | CX6g042053 | LOC_Os06g08380 | Os06g0182300 | GSL5, OsGSL5 | Detail |
| C2H6g02045 | 6:3,271,911-3,276,116 | + | C1H6g20285 | CX6g041705 | LOC_Os06g08390 | - | - | Detail |
| C2H6g17246 | 6:3,277,364-3,285,254 | + | C1H6g18809 | CX6g042466 | LOC_Os06g08400 | Os06g0182500 | - | Detail |
| C2H6g25998 | 6:3,294,069-3,294,383 | - | C1H6g30036 | - | - | - | - | Detail |
| C2H6g09876 | 6:3,319,719-3,323,508 | + | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C2H6g09197 | 6:3,328,441-3,332,856 | - | C1H6g08815 | CX6g043855 | LOC_Os06g08730 | Os06g0186500 | - | Detail |
| C2H6g26593 | 6:3,340,733-3,346,861 | + | C1H6g03621 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| C2H6g15979 | 6:3,350,815-3,354,306 | + | C1H6g04589 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C2H6g28335 | 6:3,375,421-3,380,754 | + | C1H6g29216 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C2H6g18941 | 6:3,380,961-3,388,251 | - | C1H6g11123 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H6g17086 | 6:3,393,570-3,395,054 | + | C1H6g14213 | CX6g044750 | LOC_Os06g08460 | Os06g0183600 | - | Detail |
| C2H6g26636 | 6:3,395,818-3,399,180 | - | C1H6g00515 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C2H6g26382 | 6:3,399,457-3,416,201 | - | C1H6g09185 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C2H6g23757 | 6:3,421,711-3,422,763 | - | - | CX6g044993 | LOC_Os06g08490 | Os06g0183900 | - | Detail |
| C2H6g18991 | 6:3,425,422-3,427,727 | - | C1H6g27595 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C2H6g17059 | 6:3,433,660-3,434,220 | - | C1H6g21452 | CX6g042954 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C2H6g17339 | 6:3,438,154-3,439,624 | - | C1H6g01823 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C2H6g05817 | 6:3,447,165-3,452,264 | - | C1H6g09856 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C2H6g11053 | 6:3,454,823-3,460,982 | + | C1H6g07584 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C2H6g21573 | 6:3,462,352-3,466,661 | - | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |