| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03282 | 4:7,839,230-7,844,356 | + | C2H4g15471 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C1H4g00844 | 4:7,850,541-7,851,294 | - | C2H4g22629 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C1H4g07475 | 4:8,045,740-8,052,543 | - | C2H4g17703 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C1H4g12276 | 4:8,056,878-8,059,164 | - | C2H4g28644 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C1H4g24988 | 4:8,069,828-8,075,068 | + | C2H11g21202 | - | LOC_Os10g06810 | - | - | Detail |
| C1H4g21643 | 4:8,077,295-8,077,765 | + | C2H4g21737 | - | LOC_Os10g06860 | - | - | Detail |
| C1H4g04939 | 4:8,086,420-8,087,418 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g18102 | 4:8,090,690-8,091,787 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g19581 | 4:8,135,934-8,140,510 | + | C2H4g11645 | CX4g035547 | LOC_Os04g20590 | Os04g0274400 | - | Detail |
| C1H4g18833 | 4:8,143,250-8,146,268 | + | C2H4g05451 | CX4g035160 | - | Os04g0274250 | - | Detail |
| C1H4g08176 | 4:8,152,022-8,153,181 | - | C2H4g18722 | CX4g034211 | LOC_Os04g20474 | Os04g0274100 | - | Detail |
| C1H4g21420 | 4:8,161,654-8,166,539 | + | C2H4g17258 | CX4g033803 | LOC_Os04g20560 | Os04g0273900 | - | Detail |
| C1H4g08366 | 4:8,189,994-8,191,980 | - | C2H4g29996 | CX4g031564 | LOC_Os04g20510 | Os04g0273100 | - | Detail |
| C1H4g14718 | 4:8,201,309-8,202,775 | - | C2H4g18722 | CX4g035306 | LOC_Os04g20474 | Os04g0271700 | - | Detail |
| C1H4g12470 | 4:8,220,030-8,221,268 | + | C2H4g07238 | CX4g032938 | LOC_Os04g20420 | Os04g0272400 | - | Detail |
| C1H4g16428 | 4:8,235,986-8,236,796 | + | C2H4g15311 | CX4g033602 | - | Os08g0178900 | - | Detail |
| C1H4g20808 | 4:8,247,439-8,248,917 | + | C2H4g18722 | CX4g035242 | LOC_Os04g20330 | Os04g0271700 | - | Detail |
| C1H4g05138 | 4:8,294,259-8,297,875 | - | C2H4g11411 | CX4g035052 | LOC_Os04g20280 | Os04g0271200 | - | Detail |
| C1H4g20618 | 4:8,308,360-8,321,505 | + | C2H4g16551 | CX4g035775 | LOC_Os04g20270 | Os04g0271000 | - | Detail |
| C1H4g19215 | 4:8,343,277-8,344,833 | + | C2H4g18722 | CX4g035041 | LOC_Os04g20260 | Os04g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16424 | 4:18,202,129-18,204,963 | - | C1H4g26649 | CX4g034353 | LOC_Os04g35100 | Os04g0430200 | - | Detail |
| C2H4g24538 | 4:18,205,767-18,215,164 | + | C1H4g18238 | CX4g031775 | LOC_Os04g35114 | Os04g0430400 | - | Detail |
| C2H4g27705 | 4:18,222,314-18,224,236 | + | C1H4g28825 | CX4g034052 | LOC_Os04g35130 | Os04g0430600 | - | Detail |
| C2H4g02140 | 4:18,231,428-18,233,758 | + | C1H4g07049 | CX4g034081 | LOC_Os04g35140 | Os04g0430700 | - | Detail |
| C2H4g06351 | 4:18,233,821-18,237,882 | - | C1H4g08689 | CX4g032243 | - | Os04g0430800 | - | Detail |
| C2H4g00228 | 4:18,240,905-18,244,034 | + | C1H4g16671 | CX4g031614 | LOC_Os04g35160 | Os04g0430900 | - | Detail |
| C2H4g04980 | 4:18,245,932-18,249,578 | + | C1H4g02411 | CX4g031518 | LOC_Os04g35170 | Os04g0431000 | - | Detail |
| C2H4g22899 | 4:18,249,974-18,251,867 | - | C1H4g23756 | CX4g033664 | LOC_Os04g35180 | Os04g0431100 | - | Detail |
| C2H4g08990 | 4:18,253,416-18,258,195 | + | C1H4g00828 | CX4g032072 | LOC_Os04g35190 | Os04g0431200 | OsDRF1 | Detail |
| C2H4g21469 | 4:18,258,400-18,260,264 | - | C1H4g00436 | - | LOC_Os04g35200 | Os04g0431300 | - | Detail |
| C2H4g16731 | 4:18,265,399-18,271,598 | + | C1H4g30671 | CX4g032072 | LOC_Os04g35210 | Os04g0431700 | Bph6 | Detail |
| C2H4g00292 | 4:18,273,198-18,273,533 | - | C1H4g00436 | - | LOC_Os04g35200 | Os04g0431300 | - | Detail |
| C2H4g28702 | 4:18,274,990-18,282,346 | + | C1H4g30671 | CX4g032072 | LOC_Os04g35210 | Os04g0431700 | Bph6 | Detail |
| C2H4g05691 | 4:18,283,653-18,285,954 | - | C1H4g13913 | CX4g033773 | LOC_Os04g35220 | Os04g0431800 | - | Detail |
| C2H4g00811 | 4:18,296,404-18,301,603 | + | C1H4g20735 | CX4g034641 | LOC_Os04g35240 | Os04g0432000 | SAPK7, OsSAPK7 | Detail |
| C2H4g29290 | 4:18,305,746-18,307,248 | - | C1H4g18122 | CX4g034875 | LOC_Os04g35250 | Os04g0432100 | - | Detail |
| C2H4g05666 | 4:18,309,200-18,326,486 | - | C1H4g10844 | CX4g031473 | LOC_Os04g35260 | Os04g0432200 | - | Detail |
| C2H4g04986 | 4:18,330,454-18,331,965 | + | C1H4g11061 | CX4g031867 | LOC_Os04g35270 | Os04g0432300 | - | Detail |
| C2H4g00867 | 4:18,333,631-18,338,177 | - | C1H4g30724 | CX4g034933 | LOC_Os04g35280 | Os04g0432400 | - | Detail |
| C2H4g00031 | 4:18,347,329-18,350,223 | - | C1H4g14575 | CX4g031465 | LOC_Os04g35290 | Os04g0432500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |