| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03282 | 4:7,839,230-7,844,356 | + | C2H4g15471 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C1H4g00844 | 4:7,850,541-7,851,294 | - | C2H4g22629 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C1H4g07475 | 4:8,045,740-8,052,543 | - | C2H4g17703 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C1H4g12276 | 4:8,056,878-8,059,164 | - | C2H4g28644 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C1H4g24988 | 4:8,069,828-8,075,068 | + | C2H11g21202 | - | LOC_Os10g06810 | - | - | Detail |
| C1H4g21643 | 4:8,077,295-8,077,765 | + | C2H4g21737 | - | LOC_Os10g06860 | - | - | Detail |
| C1H4g04939 | 4:8,086,420-8,087,418 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g18102 | 4:8,090,690-8,091,787 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g19581 | 4:8,135,934-8,140,510 | + | C2H4g11645 | CX4g035547 | LOC_Os04g20590 | Os04g0274400 | - | Detail |
| C1H4g18833 | 4:8,143,250-8,146,268 | + | C2H4g05451 | CX4g035160 | - | Os04g0274250 | - | Detail |
| C1H4g08176 | 4:8,152,022-8,153,181 | - | C2H4g18722 | CX4g034211 | LOC_Os04g20474 | Os04g0274100 | - | Detail |
| C1H4g21420 | 4:8,161,654-8,166,539 | + | C2H4g17258 | CX4g033803 | LOC_Os04g20560 | Os04g0273900 | - | Detail |
| C1H4g08366 | 4:8,189,994-8,191,980 | - | C2H4g29996 | CX4g031564 | LOC_Os04g20510 | Os04g0273100 | - | Detail |
| C1H4g14718 | 4:8,201,309-8,202,775 | - | C2H4g18722 | CX4g035306 | LOC_Os04g20474 | Os04g0271700 | - | Detail |
| C1H4g12470 | 4:8,220,030-8,221,268 | + | C2H4g07238 | CX4g032938 | LOC_Os04g20420 | Os04g0272400 | - | Detail |
| C1H4g16428 | 4:8,235,986-8,236,796 | + | C2H4g15311 | CX4g033602 | - | Os08g0178900 | - | Detail |
| C1H4g20808 | 4:8,247,439-8,248,917 | + | C2H4g18722 | CX4g035242 | LOC_Os04g20330 | Os04g0271700 | - | Detail |
| C1H4g05138 | 4:8,294,259-8,297,875 | - | C2H4g11411 | CX4g035052 | LOC_Os04g20280 | Os04g0271200 | - | Detail |
| C1H4g20618 | 4:8,308,360-8,321,505 | + | C2H4g16551 | CX4g035775 | LOC_Os04g20270 | Os04g0271000 | - | Detail |
| C1H4g19215 | 4:8,343,277-8,344,833 | + | C2H4g18722 | CX4g035041 | LOC_Os04g20260 | Os04g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26771 | 12:7,516,724-7,517,449 | + | C1H12g30474 | CX12g018268 | LOC_Os12g15680 | Os12g0258700 | - | Detail |
| C2H12g16441 | 12:7,517,585-7,519,692 | + | C1H12g12002 | CX12g018268 | LOC_Os12g15920 | Os12g0258700 | - | Detail |
| C2H12g27813 | 12:7,532,230-7,535,589 | - | C1H12g03182 | CX12g016536 | LOC_Os01g51680 | - | - | Detail |
| C2H12g16048 | 12:7,565,085-7,568,440 | + | C1H12g00701 | CX12g018122 | LOC_Os12g15920 | Os12g0259800 | - | Detail |
| C2H12g19844 | 12:7,572,342-7,575,120 | - | C1H12g14805 | - | - | - | - | Detail |
| C2H12g14714 | 12:7,626,015-7,626,617 | - | C1H12g31126 | CX12g015558 | - | - | - | Detail |
| C2H12g09925 | 12:7,665,570-7,666,661 | - | C1H12g10862 | CX12g018254 | LOC_Os12g16010 | Os12g0260500 | - | Detail |
| C2H12g06404 | 12:7,724,712-7,727,194 | + | C1H12g13456 | CX12g016944 | LOC_Os12g16080 | Os12g0261300 | - | Detail |
| C2H12g19114 | 12:7,741,944-7,742,252 | - | C1H12g31390 | - | - | - | - | Detail |
| C2H12g28989 | 12:7,767,589-7,768,643 | - | C1H12g08035 | CX12g017682 | LOC_Os12g16160 | - | - | Detail |
| C2H12g09413 | 12:7,783,079-7,786,948 | + | C1H12g06062 | CX12g015694 | LOC_Os12g16180 | Os12g0262700 | - | Detail |
| C2H12g02448 | 12:7,799,731-7,802,592 | - | C1H12g05864 | CX12g015586 | LOC_Os12g16200 | Os12g0263000 | OsGS2 | Detail |
| C2H12g16204 | 12:7,809,423-7,809,749 | - | C1H12g05746 | - | - | - | - | Detail |
| C2H12g27104 | 12:7,815,429-7,817,964 | - | C1H12g04992 | CX12g018598 | LOC_Os12g16210 | Os12g0263100 | - | Detail |
| C2H12g18633 | 12:7,820,487-7,824,370 | - | C1H12g09178 | CX12g017791 | LOC_Os12g16290 | Os12g0263200 | - | Detail |
| C2H12g15305 | 12:7,833,858-7,837,839 | - | C1H12g06311 | CX12g016766 | LOC_Os12g16410 | Os12g0263200 | - | Detail |
| C2H12g24725 | 12:7,855,398-7,859,902 | - | C1H12g00526 | CX12g018805 | LOC_Os12g16240 | Os12g0263600 | - | Detail |
| C2H12g28072 | 12:7,868,347-7,877,132 | - | C1H12g16075 | CX12g018805 | LOC_Os12g16240 | Os12g0263200 | - | Detail |
| C2H12g16462 | 12:7,896,330-7,897,369 | - | C1H12g06116 | CX12g015473 | LOC_Os12g16410 | Os12g0263200 | - | Detail |
| C2H12g03242 | 12:7,912,140-7,924,961 | + | C1H12g05249 | CX12g016940 | LOC_Os12g16350 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |