| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24662 | 4:30,367,835-30,368,107 | - | C1H4g08597 | CX4g036614 | LOC_Os04g58940 | Os04g0686100 | - | Detail |
| C2H4g20786 | 4:30,372,186-30,379,514 | - | C1H4g06869 | CX4g033434 | LOC_Os04g58960 | Os04g0686200 | OsRLR4 | Detail |
| C2H4g06556 | 4:30,388,698-30,390,451 | - | C1H4g27993 | CX4g033160 | LOC_Os04g58980 | Os04g0686300 | - | Detail |
| C2H4g09974 | 4:30,391,221-30,395,140 | - | C1H4g20559 | CX4g034151 | LOC_Os04g58990 | Os04g0686500 | - | Detail |
| C2H4g02812 | 4:30,395,867-30,402,331 | - | C1H4g22211 | CX4g032982 | LOC_Os04g59000 | Os04g0686650 | - | Detail |
| C2H4g14334 | 4:30,411,446-30,412,687 | - | - | CX4g032332 | LOC_Os04g59010 | Os04g0686700 | - | Detail |
| C2H4g23629 | 4:30,417,623-30,418,249 | + | - | CX4g035004 | LOC_Os04g59020 | Os04g0686800 | OsVTL5 | Detail |
| C2H4g05730 | 4:30,423,735-30,427,457 | - | C1H4g16557 | CX4g033455 | LOC_Os04g59040 | Os04g0687100 | - | Detail |
| C2H4g24423 | 4:30,436,413-30,437,110 | + | C1H4g25779 | CX4g031409 | LOC_Os04g59050 | Os04g0687200 | - | Detail |
| C2H4g17341 | 4:30,438,345-30,441,545 | - | C1H4g30754 | CX4g033457 | LOC_Os04g59060 | Os04g0687300 | OsDjC46 | Detail |
| C2H4g17357 | 4:30,450,174-30,453,017 | + | C1H4g02340 | CX4g032584 | LOC_Os04g59120 | Os04g0687800 | - | Detail |
| C2H4g08207 | 4:30,458,707-30,462,673 | + | C1H4g28490 | CX4g034877 | LOC_Os04g59130 | Os04g0687900 | - | Detail |
| C2H4g18008 | 4:30,465,310-30,466,578 | + | - | CX4g032282 | LOC_Os04g59140 | Os04g0688000 | - | Detail |
| C2H4g15410 | 4:30,470,804-30,472,082 | - | C1H4g10712 | CX4g033823 | LOC_Os04g59150 | Os04g0688100 | - | Detail |
| C2H4g21064 | 4:30,476,422-30,477,629 | - | C1H4g16364 | CX4g033823 | LOC_Os04g59160 | Os04g0688200 | - | Detail |
| C2H4g21084 | 4:30,480,100-30,481,287 | - | C1H4g06961 | CX4g033823 | LOC_Os04g59190 | Os04g0688300 | - | Detail |
| C2H4g27045 | 4:30,485,275-30,486,722 | - | C1H4g31633 | CX4g033823 | LOC_Os04g59200 | Os04g0688500 | - | Detail |
| C2H4g21882 | 4:30,493,050-30,494,150 | - | C1H4g24789 | CX4g033823 | LOC_Os04g59210 | Os04g0688600 | - | Detail |
| C2H4g02467 | 4:30,497,343-30,498,439 | - | C1H4g27691 | CX4g033823 | LOC_Os04g59260 | Os04g0689000 | - | Detail |
| C2H4g27148 | 4:30,504,008-30,506,893 | - | C1H4g07402 | CX4g032771 | LOC_Os04g59310 | Os04g0689300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |