| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06538 | 2:24,858,158-24,860,369 | - | C1H2g30325 | - | LOC_Os02g44200 | Os02g0660800 | - | Detail |
| C2H2g11376 | 2:24,866,695-24,868,579 | - | C1H2g20977 | CX2g023483 | LOC_Os02g44220 | Os02g0661000 | - | Detail |
| C2H2g24399 | 2:24,869,774-24,871,887 | - | C1H2g04631 | CX2g021647 | LOC_Os02g44230 | Os02g0661100 | - | Detail |
| C2H2g19128 | 2:24,881,492-24,882,190 | - | C1H2g25412 | CX2g022676 | LOC_Os02g44250 | Os02g0661300 | OsINP1 | Detail |
| C2H2g21204 | 2:24,883,658-24,884,645 | - | C1H2g21912 | CX2g023571 | LOC_Os02g44260 | Os02g0661400 | - | Detail |
| C2H2g30070 | 2:24,887,869-24,890,673 | + | C1H2g22461 | CX2g019731 | - | - | - | Detail |
| C2H2g04950 | 2:24,893,544-24,894,458 | - | - | CX2g022635 | LOC_Os02g44280 | Os02g0661600 | - | Detail |
| C2H2g17837 | 2:24,902,059-24,902,676 | + | - | CX2g020697 | LOC_Os02g44290 | Os02g0661800 | - | Detail |
| C2H2g27433 | 2:24,904,371-24,906,912 | + | C1H2g15114 | CX2g019044 | LOC_Os02g44300 | Os02g0661900 | - | Detail |
| C2H2g22018 | 2:24,909,353-24,909,754 | + | - | CX2g020879 | LOC_Os02g44310 | Os02g0662000 | RCc3 | Detail |
| C2H2g14990 | 2:24,922,058-24,922,444 | + | - | CX2g019337 | LOC_Os02g44320 | Os02g0662100 | - | Detail |
| C2H2g04017 | 2:24,927,035-24,929,671 | + | C1H2g19773 | CX2g020576 | LOC_Os02g44330 | Os02g0662200 | OsGEF3 | Detail |
| C2H2g28023 | 2:24,931,752-24,932,241 | - | C1H2g15266 | CX2g023295 | LOC_Os02g44340 | Os02g0662300 | - | Detail |
| C2H2g19421 | 2:24,943,577-24,945,709 | + | C1H2g05666 | CX2g020332 | LOC_Os02g44360 | Os02g0662700 | - | Detail |
| C2H2g14821 | 2:24,951,770-24,953,923 | + | C1H2g06339 | CX2g024062 | LOC_Os02g44370 | Os02g0663100 | OsHAM2 | Detail |
| C2H2g21975 | 2:24,966,909-24,986,162 | - | C1H2g09242 | CX2g024718 | LOC_Os02g44380 | Os02g0663300 | - | Detail |
| C2H2g15214 | 2:24,990,676-24,992,244 | - | C1H2g16152 | CX2g024015 | LOC_Os02g44470 | Os02g0663800 | OsADF1 | Detail |
| C2H2g17711 | 2:24,992,920-24,994,923 | - | C1H2g26889 | CX2g023576 | LOC_Os02g44480 | Os02g0106300 | - | Detail |
| C2H2g04975 | 2:24,995,124-24,997,794 | - | C1H2g29993 | CX2g024801 | LOC_Os02g44490 | Os02g0663900 | - | Detail |
| C2H2g10873 | 2:25,001,718-25,004,064 | + | C1H2g17275 | CX2g024273 | LOC_Os02g44500 | Os02g0664000 | OsGPX3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |