| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g14486 | 4:6,817,175-6,824,716 | - | C2H4g23137 | CX4g035733 | LOC_Os04g14410 | Os04g0221000 | - | Detail |
| C1H4g17568 | 4:6,828,594-6,831,355 | + | C2H4g04277 | - | LOC_Os04g14420 | - | - | Detail |
| C1H4g30087 | 4:6,838,546-6,839,772 | - | C2H4g14084 | CX4g033365 | LOC_Os04g14450 | Os04g0221300 | - | Detail |
| C1H4g30194 | 4:6,840,572-6,841,006 | - | C2H4g14084 | CX4g033365 | LOC_Os04g14130 | Os04g0110500 | - | Detail |
| C1H4g20191 | 4:6,869,806-6,879,558 | - | C2H4g15681 | CX4g036219 | LOC_Os04g14510 | Os04g0221600 | - | Detail |
| C1H4g11172 | 4:6,895,680-6,897,959 | - | C2H4g06170 | CX4g034321 | LOC_Os04g14540 | Os04g0221800 | - | Detail |
| C1H4g05154 | 4:6,922,537-6,923,256 | - | C2H4g16880 | CX4g036574 | LOC_Os04g14560 | Os04g0213800 | - | Detail |
| C1H4g27190 | 4:6,923,883-6,927,454 | - | C2H4g04514 | CX4g031595 | LOC_Os04g14570 | Os04g0226800 | - | Detail |
| C1H4g09121 | 4:6,969,066-6,985,444 | - | C2H4g15426 | CX4g033711 | LOC_Os04g14654 | Os04g0223000 | - | Detail |
| C1H4g19080 | 4:6,991,499-6,993,901 | - | C2H4g19689 | CX4g031538 | LOC_Os04g14680 | Os04g0223300 | - | Detail |
| C1H4g25173 | 4:6,996,751-7,002,926 | - | C2H4g12058 | CX4g031401 | LOC_Os04g14690 | Os04g0223500 | - | Detail |
| C1H4g16118 | 4:7,022,336-7,027,659 | - | C2H4g10349 | CX4g035150 | LOC_Os04g14690 | Os04g0223901 | - | Detail |
| C1H4g31119 | 4:7,036,081-7,045,942 | - | C2H4g13050 | CX4g032607 | LOC_Os11g41400 | - | - | Detail |
| C1H4g31787 | 4:7,056,287-7,059,770 | - | C2H4g13102 | - | - | - | - | Detail |
| C1H4g10957 | 4:7,064,606-7,069,418 | - | C2H4g12943 | CX4g031570 | LOC_Os04g14760 | Os04g0224600 | - | Detail |
| C1H4g03285 | 4:7,083,915-7,090,863 | - | C2H4g19938 | CX4g035046 | LOC_Os04g14790 | Os04g0224900 | - | Detail |
| C1H4g03083 | 4:7,097,287-7,097,922 | - | C2H4g08415 | CX4g031444 | LOC_Os04g14810 | Os04g0225100 | - | Detail |
| C1H4g26221 | 4:7,124,370-7,126,064 | - | C2H4g08150 | CX4g034584 | LOC_Os04g14840 | Os04g0103500 | SDRLK-21 | Detail |
| C1H4g22740 | 4:7,182,049-7,184,011 | + | C2H4g25571 | CX4g032785 | LOC_Os04g14990 | Os04g0225700 | - | Detail |
| C1H4g21527 | 4:7,197,540-7,199,741 | + | C2H4g26908 | CX4g032287 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g09338 | 4:23,802,793-23,803,322 | - | C1H4g09580 | CX4g035858 | LOC_Os04g46600 | Os04g0551600 | - | Detail |
| C2H4g30490 | 4:23,811,317-23,814,475 | - | C1H4g14375 | CX4g031773 | LOC_Os04g46610 | Os04g0551700 | - | Detail |
| C2H4g18666 | 4:23,814,653-23,820,953 | + | C1H4g18975 | CX4g033583 | LOC_Os04g46620 | Os04g0551800 | - | Detail |
| C2H4g22887 | 4:23,822,841-23,824,077 | + | C1H4g05752 | CX4g034498 | LOC_Os04g46630 | Os04g0552000 | - | Detail |
| C2H4g20285 | 4:23,828,116-23,829,112 | + | C1H4g21482 | CX4g036147 | LOC_Os04g46650 | Os04g0552200 | OsEXPB5 | Detail |
| C2H4g12502 | 4:23,836,141-23,836,794 | + | C1H4g09010 | CX4g035842 | LOC_Os04g46660 | Os04g0552300 | - | Detail |
| C2H4g02131 | 4:23,846,053-23,847,862 | + | C1H4g09912 | CX4g034275 | LOC_Os04g46670 | Os04g0552400 | - | Detail |
| C2H4g08222 | 4:23,851,764-23,852,693 | + | C1H4g09899 | CX4g032133 | LOC_Os04g46680 | Os04g0552700 | - | Detail |
| C2H4g05748 | 4:23,858,036-23,859,073 | + | C1H4g27612 | CX4g032057 | LOC_Os04g46700 | Os04g0553000 | - | Detail |
| C2H4g04018 | 4:23,861,515-23,865,804 | - | C1H4g04371 | CX4g034044 | LOC_Os04g46710 | Os04g0553300 | - | Detail |
| C2H4g09046 | 4:23,867,505-23,869,112 | - | C1H4g10188 | CX4g034044 | LOC_Os04g46730 | Os04g0553300 | - | Detail |
| C2H4g10015 | 4:23,871,653-23,873,839 | - | C1H4g00564 | CX4g032963 | LOC_Os04g46740 | Os04g0553650 | - | Detail |
| C2H4g07798 | 4:23,879,678-23,884,777 | - | C1H4g08701 | CX4g034448 | LOC_Os04g46750 | Os04g0553800 | - | Detail |
| C2H4g20987 | 4:23,886,302-23,888,147 | - | C1H4g12111 | CX4g032502 | LOC_Os04g46760 | Os04g0554000 | - | Detail |
| C2H4g26256 | 4:23,891,011-23,893,709 | + | C1H4g05524 | CX4g031950 | LOC_Os04g46780 | Os04g0554200 | - | Detail |
| C2H4g16654 | 4:23,894,657-23,895,328 | - | - | CX4g033479 | LOC_Os04g46790 | Os04g0554300 | - | Detail |
| C2H4g08626 | 4:23,898,340-23,898,732 | + | C1H4g29756 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C2H4g15219 | 4:23,901,510-23,901,905 | + | C1H4g29446 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C2H4g06180 | 4:23,908,627-23,909,040 | + | C1H4g22406 | CX4g034369 | LOC_Os04g46830 | Os04g0554800 | - | Detail |
| C2H4g00137 | 4:23,914,099-23,914,650 | - | C1H4g22897 | CX4g035831 | LOC_Os04g46850 | Os04g0554900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |