| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g14486 | 4:6,817,175-6,824,716 | - | C2H4g23137 | CX4g035733 | LOC_Os04g14410 | Os04g0221000 | - | Detail |
| C1H4g17568 | 4:6,828,594-6,831,355 | + | C2H4g04277 | - | LOC_Os04g14420 | - | - | Detail |
| C1H4g30087 | 4:6,838,546-6,839,772 | - | C2H4g14084 | CX4g033365 | LOC_Os04g14450 | Os04g0221300 | - | Detail |
| C1H4g30194 | 4:6,840,572-6,841,006 | - | C2H4g14084 | CX4g033365 | LOC_Os04g14130 | Os04g0110500 | - | Detail |
| C1H4g20191 | 4:6,869,806-6,879,558 | - | C2H4g15681 | CX4g036219 | LOC_Os04g14510 | Os04g0221600 | - | Detail |
| C1H4g11172 | 4:6,895,680-6,897,959 | - | C2H4g06170 | CX4g034321 | LOC_Os04g14540 | Os04g0221800 | - | Detail |
| C1H4g05154 | 4:6,922,537-6,923,256 | - | C2H4g16880 | CX4g036574 | LOC_Os04g14560 | Os04g0213800 | - | Detail |
| C1H4g27190 | 4:6,923,883-6,927,454 | - | C2H4g04514 | CX4g031595 | LOC_Os04g14570 | Os04g0226800 | - | Detail |
| C1H4g09121 | 4:6,969,066-6,985,444 | - | C2H4g15426 | CX4g033711 | LOC_Os04g14654 | Os04g0223000 | - | Detail |
| C1H4g19080 | 4:6,991,499-6,993,901 | - | C2H4g19689 | CX4g031538 | LOC_Os04g14680 | Os04g0223300 | - | Detail |
| C1H4g25173 | 4:6,996,751-7,002,926 | - | C2H4g12058 | CX4g031401 | LOC_Os04g14690 | Os04g0223500 | - | Detail |
| C1H4g16118 | 4:7,022,336-7,027,659 | - | C2H4g10349 | CX4g035150 | LOC_Os04g14690 | Os04g0223901 | - | Detail |
| C1H4g31119 | 4:7,036,081-7,045,942 | - | C2H4g13050 | CX4g032607 | LOC_Os11g41400 | - | - | Detail |
| C1H4g31787 | 4:7,056,287-7,059,770 | - | C2H4g13102 | - | - | - | - | Detail |
| C1H4g10957 | 4:7,064,606-7,069,418 | - | C2H4g12943 | CX4g031570 | LOC_Os04g14760 | Os04g0224600 | - | Detail |
| C1H4g03285 | 4:7,083,915-7,090,863 | - | C2H4g19938 | CX4g035046 | LOC_Os04g14790 | Os04g0224900 | - | Detail |
| C1H4g03083 | 4:7,097,287-7,097,922 | - | C2H4g08415 | CX4g031444 | LOC_Os04g14810 | Os04g0225100 | - | Detail |
| C1H4g26221 | 4:7,124,370-7,126,064 | - | C2H4g08150 | CX4g034584 | LOC_Os04g14840 | Os04g0103500 | SDRLK-21 | Detail |
| C1H4g22740 | 4:7,182,049-7,184,011 | + | C2H4g25571 | CX4g032785 | LOC_Os04g14990 | Os04g0225700 | - | Detail |
| C1H4g21527 | 4:7,197,540-7,199,741 | + | C2H4g26908 | CX4g032287 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g25287 | 2:6,134,653-6,138,787 | - | C1H2g22063 | CX2g024846 | LOC_Os02g12740 | Os02g0219400 | OsGPI8 | Detail |
| C2H2g26355 | 2:6,139,824-6,143,145 | + | C1H2g00777 | CX2g024479 | LOC_Os02g12750 | Os02g0219800 | OsTET2 | Detail |
| C2H2g23365 | 2:6,143,689-6,146,099 | - | C1H2g30667 | CX2g021650 | LOC_Os02g12760 | Os02g0219900 | - | Detail |
| C2H2g09377 | 2:6,150,810-6,152,634 | + | C1H2g24521 | CX2g022104 | LOC_Os02g12780 | Os02g0220000 | OsCKX6 | Detail |
| C2H2g12835 | 2:6,157,473-6,159,308 | + | C1H2g15795 | CX2g022995 | LOC_Os02g12780 | Os02g0220100 | OsCKX7 | Detail |
| C2H2g28607 | 2:6,177,317-6,179,212 | - | C1H2g30241 | CX2g024290 | LOC_Os02g12790 | Os02g0220400 | CGA1, Cga1, OsCga1, OsCGA1, OsGATA11, GATA11 | Detail |
| C2H2g14333 | 2:6,188,423-6,191,866 | + | C1H2g23503 | CX2g019563 | LOC_Os02g12794 | Os02g0220500 | - | Detail |
| C2H2g18250 | 2:6,194,245-6,198,260 | + | C1H2g00344 | CX2g019782 | LOC_Os02g12794 | Os02g0220600 | - | Detail |
| C2H2g03696 | 2:6,199,220-6,205,542 | - | C1H2g04441 | CX2g024312 | LOC_Os02g12810 | Os02g0220700 | - | Detail |
| C2H2g00523 | 2:6,216,219-6,221,035 | - | C1H2g21438 | CX2g024912 | LOC_Os02g12820 | Os02g0221100 | - | Detail |
| C2H2g12344 | 2:6,238,778-6,242,088 | - | C1H2g15495 | - | - | - | - | Detail |
| C2H2g11540 | 2:6,246,448-6,250,595 | + | C1H2g12870 | CX2g022115 | LOC_Os02g12840 | Os02g0221300 | - | Detail |
| C2H2g13827 | 2:6,261,238-6,264,546 | - | C1H2g13065 | CX2g023110 | LOC_Os02g12850 | Os02g0221500 | - | Detail |
| C2H2g10410 | 2:6,267,485-6,270,415 | + | C1H2g20786 | CX2g021581 | LOC_Os02g12870 | Os02g0221600 | - | Detail |
| C2H2g06088 | 2:6,276,383-6,280,253 | + | C1H2g10087 | CX2g021336 | LOC_Os02g12880 | Os02g0221800 | - | Detail |
| C2H2g18416 | 2:6,280,391-6,282,830 | - | C1H2g03914 | CX2g021518 | LOC_Os02g12890 | Os02g0221900 | - | Detail |
| C2H2g22233 | 2:6,288,618-6,291,787 | + | C1H2g18447 | CX2g020786 | LOC_Os02g12900 | Os02g0222100 | - | Detail |
| C2H2g17422 | 2:6,292,974-6,296,045 | + | C1H2g12833 | CX2g020146 | LOC_Os02g12910 | Os02g0222200 | - | Detail |
| C2H2g24693 | 2:6,331,737-6,334,458 | + | C1H2g01417 | CX2g019584 | LOC_Os02g10840 | Os02g0608300 | - | Detail |
| C2H2g02961 | 2:6,336,645-6,339,362 | + | C1H2g03908 | CX2g023753 | LOC_Os02g12910 | Os02g0222600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |