| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g06817 | 4:5,997,272-5,999,268 | - | C2H4g06798 | CX4g033024 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g29001 | 4:6,007,325-6,010,223 | + | C2H4g29510 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g08485 | 4:6,014,586-6,015,481 | + | - | - | LOC_Os04g13000 | - | - | Detail |
| C1H4g28005 | 4:6,052,615-6,053,729 | - | C2H4g06140 | CX4g035110 | LOC_Os04g13090 | Os04g0207600 | - | Detail |
| C1H4g30629 | 4:6,078,229-6,079,619 | + | C2H4g20550 | CX4g035112 | LOC_Os04g13140 | Os04g0208200 | - | Detail |
| C1H4g15636 | 4:6,081,357-6,083,187 | - | C2H4g17798 | CX4g033448 | LOC_Os04g13150 | Os04g0208400 | BRT1, OsFBX125 | Detail |
| C1H4g07664 | 4:6,086,344-6,088,096 | - | C2H4g01739 | CX4g032433 | LOC_Os04g13160 | Os04g0208500 | - | Detail |
| C1H4g06544 | 4:6,090,874-6,092,681 | - | C2H4g10339 | CX4g035372 | LOC_Os04g13170 | Os04g0208600 | - | Detail |
| C1H4g04010 | 4:6,115,110-6,115,454 | + | - | CX4g031728 | LOC_Os04g13190 | Os04g0208900 | - | Detail |
| C1H4g10533 | 4:6,129,712-6,141,211 | - | C2H4g00571 | CX4g033845 | LOC_Os04g13210 | Os04g0209200 | OsABCC9 | Detail |
| C1H4g24328 | 4:6,145,170-6,153,291 | - | C2H4g15555 | CX4g033865 | LOC_Os04g13220 | Os04g0209300 | - | Detail |
| C1H4g07264 | 4:6,190,163-6,190,788 | + | C2H4g04516 | CX4g035176 | - | - | - | Detail |
| C1H4g15372 | 4:6,234,507-6,237,544 | + | C2H4g06684 | CX4g033836 | LOC_Os04g13364 | Os04g0210700 | - | Detail |
| C1H4g09398 | 4:6,254,214-6,256,975 | - | - | CX4g032533 | - | Os04g0211700 | - | Detail |
| C1H4g21140 | 4:6,266,317-6,267,846 | - | C2H4g07997 | CX4g034363 | LOC_Os04g13460 | Os04g0211900 | - | Detail |
| C1H4g21611 | 4:6,297,208-6,298,079 | - | C2H4g07997 | CX4g034363 | LOC_Os04g13460 | Os04g0211900 | - | Detail |
| C1H4g12804 | 4:6,328,236-6,342,083 | + | C2H4g28740 | CX4g033200 | LOC_Os04g13470 | Os04g0212200 | - | Detail |
| C1H4g25525 | 4:6,345,808-6,346,346 | + | C2H4g27029 | CX4g033217 | LOC_Os04g13480 | Os04g0212450 | - | Detail |
| C1H4g04473 | 4:6,379,745-6,382,441 | + | C2H4g27586 | CX4g031980 | LOC_Os04g13530 | Os04g0212700 | - | Detail |
| C1H4g19407 | 4:6,422,750-6,424,143 | - | - | CX4g036131 | LOC_Os04g13540 | Os04g0213100 | OsHFP | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21630 | 12:19,495,082-19,500,363 | + | C1H12g09007 | CX12g015608 | LOC_Os12g38110 | Os12g0568800 | - | Detail |
| C2H12g09314 | 12:19,502,683-19,503,363 | + | C1H12g02048 | CX12g016110 | LOC_Os12g38120 | Os12g0568900 | - | Detail |
| C2H12g01725 | 12:19,508,960-19,509,454 | + | C1H12g18175 | CX12g016216 | LOC_Os12g38140 | Os12g0569200 | - | Detail |
| C2H12g10251 | 12:19,523,987-19,524,682 | + | C1H12g06244 | CX12g016111 | LOC_Os12g38150 | Os12g0569300 | OsOSM2 | Detail |
| C2H12g16373 | 12:19,531,758-19,532,462 | + | C1H12g28088 | CX12g018210 | LOC_Os12g38170 | Os12g0569500 | OsOSM1 | Detail |
| C2H12g12141 | 12:19,535,575-19,540,875 | + | C1H12g30666 | CX12g016733 | - | Os12g0569700 | - | Detail |
| C2H12g20078 | 12:19,547,901-19,549,374 | + | C1H12g00168 | CX12g018309 | LOC_Os12g38200 | Os12g0590700 | - | Detail |
| C2H12g18880 | 12:19,556,496-19,561,639 | - | C1H12g10303 | CX12g018422 | LOC_Os12g38210 | Os12g0570000 | SPL11 | Detail |
| C2H12g04128 | 12:19,569,888-19,570,472 | - | C1H12g24928 | CX12g016731 | LOC_Os12g38230 | Os12g0570300 | - | Detail |
| C2H12g09583 | 12:19,576,765-19,577,397 | + | C1H12g24952 | CX12g015447 | LOC_Os12g38250 | Os12g0570400 | - | Detail |
| C2H12g26301 | 12:19,578,296-19,583,174 | + | C1H12g04792 | CX12g017144 | LOC_Os12g38260 | Os12g0570500 | - | Detail |
| C2H12g00566 | 12:19,585,515-19,586,089 | + | C1H12g24857 | CX12g017124 | LOC_Os12g38270 | Os12g0570700 | - | Detail |
| C2H12g13163 | 12:19,590,359-19,591,046 | + | C1H12g22227 | CX12g017124 | LOC_Os12g38290 | Os12g0571000 | - | Detail |
| C2H12g18304 | 12:19,592,855-19,593,487 | + | C1H12g10209 | CX12g017124 | LOC_Os12g38290 | Os12g0571100 | MTI4C, MT-1-4b, OsMT1d, OsMT-I-4c | Detail |
| C2H12g08353 | 12:19,594,388-19,595,845 | + | C1H12g31880 | CX12g018738 | LOC_Os12g38310 | Os12g0571200 | - | Detail |
| C2H12g09891 | 12:19,597,833-19,598,603 | - | C1H12g16299 | CX12g015965 | LOC_Os12g38320 | Os12g0571300 | - | Detail |
| C2H12g06418 | 12:19,607,776-19,608,225 | - | C1H12g29524 | CX12g015646 | - | - | - | Detail |
| C2H12g12045 | 12:19,613,492-19,613,893 | + | C1H12g00013 | CX12g018241 | LOC_Os12g38340 | Os12g0571500 | - | Detail |
| C2H12g22265 | 12:19,616,933-19,617,367 | + | C1H12g14796 | CX12g017618 | LOC_Os12g38350 | Os12g0571600 | - | Detail |
| C2H12g04558 | 12:19,619,310-19,619,678 | + | C1H12g13878 | CX12g017487 | LOC_Os12g38360 | Os12g0571700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |