| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g14846 | 4:5,874,627-5,877,059 | - | C2H4g12193 | CX4g032586 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C1H4g18742 | 4:5,893,442-5,895,408 | - | C2H4g18743 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C1H4g19896 | 4:5,901,400-5,902,527 | + | C2H4g09802 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g29887 | 4:5,903,313-5,904,658 | + | C2H4g21161 | - | - | - | - | Detail |
| C1H4g20976 | 4:5,907,250-5,909,143 | - | C2H4g12841 | CX4g031765 | LOC_Os04g12950 | Os04g0203600 | - | Detail |
| C1H4g28286 | 4:5,911,019-5,913,015 | - | C2H4g21936 | CX4g031919 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g16067 | 4:5,915,586-5,917,588 | - | C2H4g02969 | CX4g035782 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g27745 | 4:5,921,715-5,924,694 | + | C2H4g16076 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g31293 | 4:5,929,933-5,932,243 | - | C2H4g23571 | CX4g035248 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| C1H4g20788 | 4:5,935,021-5,936,148 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g09867 | 4:5,936,582-5,938,412 | + | C2H4g10642 | - | - | - | - | Detail |
| C1H4g10329 | 4:5,950,911-5,951,514 | + | C2H4g07483 | - | - | Os04g0203450 | - | Detail |
| C1H4g06112 | 4:5,952,931-5,955,048 | - | C2H4g06798 | CX4g033024 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g00866 | 4:5,957,490-5,957,897 | - | C2H4g21810 | CX4g031758 | LOC_Os04g12720 | Os04g0206600 | Os79 | Detail |
| C1H4g18509 | 4:5,958,088-5,959,491 | - | C2H4g21810 | CX4g036312 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g07274 | 4:5,963,500-5,966,277 | + | C2H4g29510 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g18027 | 4:5,966,918-5,968,927 | - | C2H4g16445 | CX4g035007 | LOC_Os04g12990 | - | - | Detail |
| C1H4g10301 | 4:5,974,118-5,975,205 | - | C2H4g16703 | CX4g036323 | LOC_Os01g44200 | Os04g0206200 | - | Detail |
| C1H4g17664 | 4:5,977,971-5,979,098 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g15310 | 4:5,993,827-5,995,580 | - | C2H4g02969 | CX4g031765 | LOC_Os04g12950 | Os04g0206600 | Os79 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15300 | 1:18,093,442-18,093,846 | + | - | - | - | - | - | Detail |
| C2H1g23586 | 1:18,095,488-18,095,906 | + | - | CX7g047100 | - | - | - | Detail |
| C2H1g09191 | 1:18,113,603-18,116,657 | - | C1H1g16984 | CX1g000818 | LOC_Os01g35990 | Os01g0541600 | - | Detail |
| C2H1g09441 | 1:18,131,818-18,133,616 | + | C1H1g24864 | CX1g005180 | LOC_Os01g36070 | Os01g0541800 | SWEET2a | Detail |
| C2H1g12295 | 1:18,134,908-18,142,724 | - | C1H1g16612 | CX1g004838 | LOC_Os01g36080 | Os01g0541900 | - | Detail |
| C2H1g10104 | 1:18,144,478-18,145,418 | - | - | - | - | - | - | Detail |
| C2H1g12577 | 1:18,207,947-18,212,038 | + | C1H1g29888 | CX1g003620 | LOC_Os01g36240 | Os01g0543100 | - | Detail |
| C2H1g02067 | 1:18,225,633-18,227,759 | + | C1H12g01910 | CX12g015955 | LOC_Os11g31790 | Os01g0697250 | - | Detail |
| C2H1g25710 | 1:18,257,935-18,260,296 | + | C1H1g17492 | CX4g035708 | LOC_Os01g36270 | Os01g0214200 | - | Detail |
| C2H1g23295 | 1:18,271,316-18,273,489 | + | C1H1g04460 | CX1g002230 | LOC_Os01g36350 | Os01g0544200 | - | Detail |
| C2H1g06257 | 1:18,275,765-18,280,822 | - | C1H6g00903 | CX1g003226 | LOC_Os08g15600 | - | - | Detail |
| C2H1g21574 | 1:18,308,580-18,309,035 | + | C1H1g30489 | CX1g006076 | - | - | - | Detail |
| C2H1g02661 | 1:18,313,835-18,318,532 | + | C1H1g15732 | CX1g002433 | LOC_Os01g36390 | Os01g0544450 | - | Detail |
| C2H1g03774 | 1:18,366,937-18,368,761 | - | C1H1g17288 | CX1g004563 | LOC_Os01g36460 | Os01g0545100 | Os2R_MYB8 | Detail |
| C2H1g05288 | 1:18,384,968-18,385,652 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g15806 | 1:18,396,129-18,397,426 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g04409 | 1:18,398,309-18,399,526 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g26336 | 1:18,422,948-18,425,966 | + | C1H1g19939 | CX1g000063 | LOC_Os01g36550 | Os01g0546000 | - | Detail |
| C2H1g28449 | 1:18,426,593-18,429,452 | - | C1H1g27885 | CX1g004410 | LOC_Os01g36560 | Os01g0546100 | - | Detail |
| C2H1g26658 | 1:18,436,829-18,440,650 | - | C1H1g03906 | CX1g005411 | LOC_Os01g36580 | Os01g0546400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |