| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g14846 | 4:5,874,627-5,877,059 | - | C2H4g12193 | CX4g032586 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C1H4g18742 | 4:5,893,442-5,895,408 | - | C2H4g18743 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C1H4g19896 | 4:5,901,400-5,902,527 | + | C2H4g09802 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g29887 | 4:5,903,313-5,904,658 | + | C2H4g21161 | - | - | - | - | Detail |
| C1H4g20976 | 4:5,907,250-5,909,143 | - | C2H4g12841 | CX4g031765 | LOC_Os04g12950 | Os04g0203600 | - | Detail |
| C1H4g28286 | 4:5,911,019-5,913,015 | - | C2H4g21936 | CX4g031919 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g16067 | 4:5,915,586-5,917,588 | - | C2H4g02969 | CX4g035782 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g27745 | 4:5,921,715-5,924,694 | + | C2H4g16076 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g31293 | 4:5,929,933-5,932,243 | - | C2H4g23571 | CX4g035248 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| C1H4g20788 | 4:5,935,021-5,936,148 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g09867 | 4:5,936,582-5,938,412 | + | C2H4g10642 | - | - | - | - | Detail |
| C1H4g10329 | 4:5,950,911-5,951,514 | + | C2H4g07483 | - | - | Os04g0203450 | - | Detail |
| C1H4g06112 | 4:5,952,931-5,955,048 | - | C2H4g06798 | CX4g033024 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g00866 | 4:5,957,490-5,957,897 | - | C2H4g21810 | CX4g031758 | LOC_Os04g12720 | Os04g0206600 | Os79 | Detail |
| C1H4g18509 | 4:5,958,088-5,959,491 | - | C2H4g21810 | CX4g036312 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g07274 | 4:5,963,500-5,966,277 | + | C2H4g29510 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g18027 | 4:5,966,918-5,968,927 | - | C2H4g16445 | CX4g035007 | LOC_Os04g12990 | - | - | Detail |
| C1H4g10301 | 4:5,974,118-5,975,205 | - | C2H4g16703 | CX4g036323 | LOC_Os01g44200 | Os04g0206200 | - | Detail |
| C1H4g17664 | 4:5,977,971-5,979,098 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g15310 | 4:5,993,827-5,995,580 | - | C2H4g02969 | CX4g031765 | LOC_Os04g12950 | Os04g0206600 | Os79 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21601 | 3:1,101,382-1,102,831 | + | C1H3g27844 | CX3g026041 | LOC_Os03g03140 | Os03g0123200 | - | Detail |
| C2H3g04889 | 3:1,105,886-1,109,785 | + | C1H3g09795 | CX3g029979 | LOC_Os03g03150 | Os03g0123300 | - | Detail |
| C2H3g00396 | 3:1,118,577-1,124,034 | + | C1H3g14139 | CX3g026340 | LOC_Os03g03164 | Os03g0123500 | HOS66, HOS66S | Detail |
| C2H3g00632 | 3:1,125,113-1,128,275 | - | C1H3g07667 | CX3g027409 | LOC_Os03g03180 | Os03g0123600 | - | Detail |
| C2H3g19198 | 3:1,131,242-1,132,201 | - | C1H3g01390 | CX3g025593 | LOC_Os11g34910 | Os11g0550300 | - | Detail |
| C2H3g13822 | 3:1,136,027-1,137,821 | + | C1H3g08918 | CX3g025457 | LOC_Os03g03200 | Os03g0123800 | - | Detail |
| C2H3g17363 | 3:1,139,674-1,140,372 | + | C1H3g08025 | CX3g029809 | LOC_Os02g13020 | - | - | Detail |
| C2H3g11416 | 3:1,149,380-1,155,297 | + | C1H3g22053 | CX3g025586 | LOC_Os03g03260 | Os03g0124000 | OsHB22 | Detail |
| C2H3g23812 | 3:1,157,950-1,159,621 | + | C1H3g12842 | CX3g029945 | LOC_Os03g03270 | Os03g0124100 | - | Detail |
| C2H3g17495 | 3:1,161,542-1,164,223 | + | C1H3g06423 | CX3g029915 | LOC_Os03g03280 | Os03g0124200 | - | Detail |
| C2H3g27072 | 3:1,165,734-1,167,134 | + | C1H3g21157 | CX3g027531 | LOC_Os03g03290 | Os03g0124300 | - | Detail |
| C2H3g24607 | 3:1,174,136-1,175,014 | + | C1H3g07613 | CX3g026326 | LOC_Os03g03320 | Os03g0124500 | - | Detail |
| C2H3g11584 | 3:1,184,324-1,187,483 | + | C1H3g04841 | CX3g030707 | LOC_Os03g03350 | Os03g0124900 | OsPG1 | Detail |
| C2H3g17248 | 3:1,187,480-1,189,011 | - | C1H3g23961 | CX3g028338 | LOC_Os03g03360 | Os03g0125000 | - | Detail |
| C2H3g15002 | 3:1,190,373-1,192,792 | - | C1H3g31110 | CX3g029957 | LOC_Os03g03370 | Os03g0125100 | DSM2, OsBCH1, OsHYD3 | Detail |
| C2H3g15732 | 3:1,198,489-1,205,837 | + | C1H3g17673 | CX3g026725 | LOC_Os03g03390 | Os03g0125300 | - | Detail |
| C2H3g14454 | 3:1,210,249-1,214,765 | + | C1H3g28194 | CX3g029384 | LOC_Os03g03410 | Os03g0125600 | - | Detail |
| C2H3g24007 | 3:1,218,289-1,221,134 | - | C1H3g27909 | CX3g031344 | LOC_Os03g03420 | Os03g0125700 | - | Detail |
| C2H3g10898 | 3:1,222,357-1,222,747 | + | - | - | - | - | - | Detail |
| C2H3g15544 | 3:1,229,309-1,234,862 | + | C1H3g30116 | CX3g029108 | LOC_Os03g03430 | Os03g0125800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |