| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g24632 | 8:1,685,264-1,685,830 | + | C1H8g24449 | CX8g053613 | LOC_Os08g04370 | Os08g0138200 | - | Detail |
| C2H8g08681 | 8:1,694,557-1,695,301 | + | C1H8g15940 | CX8g053613 | LOC_Os08g04370 | Os08g0138400 | - | Detail |
| C2H8g21969 | 8:1,695,777-1,698,310 | - | C1H8g05466 | CX8g053230 | LOC_Os08g04390 | Os08g0138500 | OsPRI1 | Detail |
| C2H8g26865 | 8:1,701,568-1,703,652 | + | C1H8g19565 | CX8g051177 | LOC_Os08g04400 | Os08g0138600 | - | Detail |
| C2H8g11778 | 8:1,705,072-1,706,082 | + | C1H8g14523 | CX8g054582 | - | - | - | Detail |
| C2H8g07146 | 8:1,707,028-1,710,034 | - | C1H8g18467 | CX8g050431 | LOC_Os08g04420 | Os08g0138700 | - | Detail |
| C2H8g18618 | 8:1,717,861-1,718,352 | - | C1H8g27062 | CX8g052059 | LOC_Os08g04430 | Os08g0138900 | - | Detail |
| C2H8g06220 | 8:1,721,229-1,724,272 | - | C1H8g03438 | CX8g051036 | LOC_Os08g04440 | Os08g0139000 | - | Detail |
| C2H8g21692 | 8:1,727,018-1,728,729 | - | C1H8g15641 | CX8g053718 | LOC_Os08g04450 | Os08g0139100 | OsMORF9 | Detail |
| C2H8g21939 | 8:1,732,072-1,733,909 | - | C1H8g18260 | CX8g050588 | LOC_Os08g04460 | Os08g0139200 | - | Detail |
| C2H8g16693 | 8:1,753,312-1,755,624 | + | C1H8g25614 | CX8g051739 | LOC_Os08g04490 | Os08g0149800 | - | Detail |
| C2H8g02379 | 8:1,756,733-1,760,587 | - | C1H8g27402 | CX8g051580 | LOC_Os08g04500 | Os08g0139700 | OsTPS3 | Detail |
| C2H8g06408 | 8:1,811,526-1,814,084 | - | C1H8g15879 | CX8g052130 | LOC_Os08g04580 | Os08g0140700 | - | Detail |
| C2H8g20133 | 8:1,815,621-1,819,805 | + | C1H8g12038 | CX8g053331 | LOC_Os08g04590 | Os08g0141000 | - | Detail |
| C2H8g01787 | 8:1,827,894-1,828,142 | + | C1H8g19104 | - | - | - | - | Detail |
| C2H8g05446 | 8:1,828,186-1,830,283 | + | C1H8g02855 | CX8g051655 | LOC_Os08g04590 | Os08g0141000 | - | Detail |
| C2H8g03239 | 8:1,840,421-1,842,592 | + | C1H8g22646 | CX8g054144 | LOC_Os08g04620 | Os08g0141300 | OsVST1 | Detail |
| C2H8g15761 | 8:1,844,490-1,849,576 | - | C1H8g14043 | CX8g051133 | LOC_Os08g04630 | Os08g0141400 | - | Detail |
| C2H8g18095 | 8:1,874,442-1,874,837 | + | - | - | - | - | - | Detail |
| C2H8g09072 | 8:1,877,627-1,878,193 | - | - | - | LOC_Os08g04710 | Os08g0142500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |