| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03391 | 6:22,018,466-22,020,171 | + | - | CX10g010054 | LOC_Os10g21236 | - | - | Detail |
| C2H6g29467 | 6:22,020,966-22,021,531 | + | - | - | LOC_Os10g21230 | - | - | Detail |
| C2H6g26608 | 6:22,023,138-22,024,661 | + | C1H6g24215 | CX6g042100 | LOC_Os10g21240 | Os06g0568200 | - | Detail |
| C2H6g11551 | 6:22,027,926-22,029,599 | - | - | CX6g044619 | LOC_Os10g21250 | - | - | Detail |
| C2H6g06159 | 6:22,030,779-22,031,889 | - | - | CX6g043647 | LOC_Os10g21254 | - | - | Detail |
| C2H6g25362 | 6:22,037,482-22,037,907 | - | - | CX6g045339 | LOC_Os01g58022 | Os12g0423484 | - | Detail |
| C2H6g02598 | 6:22,053,748-22,054,128 | - | C1H6g11277 | CX2g023961 | LOC_Os06g41870 | Os06g0624000 | - | Detail |
| C2H6g02719 | 6:22,060,871-22,066,113 | + | C1H6g01359 | CX6g042465 | LOC_Os06g41880 | Os06g0624100 | - | Detail |
| C2H6g00747 | 6:22,061,584-22,067,112 | - | C1H6g00796 | - | - | - | - | Detail |
| C2H6g16937 | 6:22,072,841-22,075,445 | + | C1H6g18313 | CX6g041453 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| C2H6g18819 | 6:22,090,234-22,094,540 | + | C1H6g11989 | CX6g045135 | LOC_Os06g41930 | Os06g0624900 | - | Detail |
| C2H6g11568 | 6:22,109,151-22,110,388 | + | - | - | - | - | - | Detail |
| C2H6g28797 | 6:22,113,460-22,115,442 | + | C1H6g11677 | CX6g045536 | LOC_Os06g41980 | Os06g0625200 | - | Detail |
| C2H6g01537 | 6:22,115,534-22,125,784 | - | C1H6g13871 | CX6g045878 | LOC_Os06g41990 | Os06g0625400 | SPP | Detail |
| C2H6g02688 | 6:22,139,230-22,139,878 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g09068 | 6:22,140,686-22,144,628 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g22642 | 6:22,144,214-22,150,577 | - | C1H6g31374 | CX6g042213 | LOC_Os06g42030 | Os06g0625800 | - | Detail |
| C2H6g11680 | 6:22,172,783-22,174,774 | + | C1H6g23109 | CX6g045268 | - | - | - | Detail |
| C2H6g15686 | 6:22,220,512-22,222,055 | + | C1H6g09355 | CX6g045016 | LOC_Os06g42280 | Os06g0628032 | - | Detail |
| C2H6g14286 | 6:22,231,427-22,238,847 | - | C1H6g08901 | CX6g043658 | LOC_Os06g42310 | Os06g0628500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |