| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16872 | 6:10,997,267-11,004,133 | - | C1H6g18187 | CX6g043053 | LOC_Os06g30320 | Os06g0498500 | - | Detail |
| C2H6g24539 | 6:11,008,794-11,020,052 | - | C1H6g27568 | CX6g041803 | LOC_Os06g30310 | Os06g0498400 | GWD1 | Detail |
| C2H6g28468 | 6:11,029,006-11,029,335 | + | - | CX6g041524 | LOC_Os06g30280 | Os06g0498150 | MEG3 | Detail |
| C2H6g19115 | 6:11,033,833-11,034,486 | - | - | CX6g045362 | LOC_Os06g30250 | Os06g0498000 | - | Detail |
| C2H6g15191 | 6:11,036,536-11,036,823 | + | - | CX6g042406 | LOC_Os06g30240 | - | - | Detail |
| C2H6g11795 | 6:11,039,951-11,040,304 | + | - | CX6g042976 | LOC_Os06g30230 | - | - | Detail |
| C2H6g28212 | 6:11,048,146-11,052,405 | - | C1H6g26182 | CX6g043036 | LOC_Os06g30210 | Os06g0497500 | - | Detail |
| C2H6g12814 | 6:11,067,035-11,068,932 | - | C1H6g07599 | CX6g042956 | LOC_Os06g30179 | Os06g0497350 | - | Detail |
| C2H6g12911 | 6:11,103,174-11,103,936 | - | C1H6g09677 | CX6g045078 | LOC_Os06g30130 | Os06g0496800 | - | Detail |
| C2H6g14409 | 6:11,104,066-11,105,664 | - | C1H6g09677 | CX6g045078 | LOC_Os06g30130 | Os06g0496800 | - | Detail |
| C2H6g25876 | 6:11,131,829-11,132,813 | - | C1H6g04894 | CX6g041544 | LOC_Os06g30090 | Os06g0496400 | OsbHLH127, OsRSL3 | Detail |
| C2H6g13439 | 6:11,144,609-11,151,946 | - | C1H6g31457 | CX6g043076 | LOC_Os06g30060 | Os06g0496000 | - | Detail |
| C2H6g00870 | 6:11,164,793-11,165,801 | - | C1H6g22414 | CX6g043852 | LOC_Os06g30030 | Os06g0495800 | - | Detail |
| C2H6g25334 | 6:11,170,377-11,177,818 | - | C1H6g11371 | CX6g042382 | LOC_Os06g30020 | Os06g0495700 | - | Detail |
| C2H6g17906 | 6:11,181,323-11,185,243 | - | C1H6g09138 | CX6g045784 | LOC_Os06g29994 | Os06g0495500 | - | Detail |
| C2H6g25326 | 6:11,189,169-11,189,577 | - | C1H6g24752 | CX6g045784 | LOC_Os06g29994 | Os06g0495500 | - | Detail |
| C2H6g03951 | 6:11,191,411-11,191,752 | + | - | - | - | - | - | Detail |
| C2H6g19382 | 6:11,193,291-11,194,092 | - | C1H6g08183 | CX6g045784 | LOC_Os06g29950 | Os06g0495100 | - | Detail |
| C2H6g15862 | 6:11,208,108-11,208,764 | - | - | - | - | - | - | Detail |
| C2H6g29308 | 6:11,245,612-11,254,336 | - | C1H6g24097 | CX6g045784 | LOC_Os06g29844 | Os06g0494400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |