| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g07936 | 4:3,845,979-3,846,753 | - | C2H4g19699 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C1H4g00886 | 4:3,858,267-3,862,987 | - | C2H4g19699 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C1H4g30482 | 4:3,907,013-3,911,500 | - | C2H4g02357 | CX4g036574 | LOC_Os04g09770 | Os04g0177000 | - | Detail |
| C1H4g18497 | 4:3,913,645-3,914,572 | - | C2H4g05769 | - | LOC_Os04g09780 | Os04g0177100 | - | Detail |
| C1H4g30399 | 4:3,921,327-3,927,118 | - | C2H4g27475 | CX4g034078 | LOC_Os04g09800 | Os04g0177300 | OsCHR735, CHR735 | Detail |
| C1H4g22479 | 4:3,929,816-3,931,810 | - | C2H4g20561 | CX4g034820 | LOC_Os04g09810 | Os04g0177400 | - | Detail |
| C1H4g23867 | 4:3,937,603-3,937,944 | + | - | CX4g036109 | - | Os04g0177500 | - | Detail |
| C1H4g19750 | 4:3,939,617-3,953,493 | - | C2H4g20320 | CX4g036116 | - | Os04g0177600 | - | Detail |
| C1H4g12052 | 4:3,967,466-3,968,321 | + | C2H4g26728 | CX4g032774 | LOC_Os04g09900 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C1H4g09839 | 4:3,968,659-3,973,655 | + | C2H4g23853 | CX4g032774 | LOC_Os04g09900 | Os04g0178300 | OsCPS4, Os-CPS4, OsCyc1, OsCPSsyn | Detail |
| C1H4g28574 | 4:3,984,451-3,986,302 | - | C2H4g09237 | CX4g036126 | LOC_Os04g09920 | Os04g0178400 | CYP99A3 | Detail |
| C1H4g09507 | 4:4,009,887-4,010,539 | - | - | CX4g036382 | - | - | - | Detail |
| C1H4g30336 | 4:4,027,038-4,027,982 | - | C2H4g09020 | CX4g033846 | LOC_Os04g10000 | Os04g0179100 | - | Detail |
| C1H4g01524 | 4:4,033,530-4,034,485 | - | C2H4g10076 | CX4g035289 | LOC_Os04g10010 | Os04g0179200 | - | Detail |
| C1H4g08248 | 4:4,076,377-4,081,777 | - | C2H4g06763 | CX4g034737 | LOC_Os04g10060 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C1H4g04065 | 4:4,105,075-4,106,760 | + | C2H4g06078 | CX4g034919 | LOC_Os04g10160 | Os04g0180400 | - | Detail |
| C1H4g03949 | 4:4,166,936-4,169,530 | - | C2H4g21850 | CX4g035733 | LOC_Os04g10210 | Os04g0221000 | - | Detail |
| C1H4g10325 | 4:4,175,560-4,178,590 | - | C2H4g14385 | CX4g036149 | LOC_Os04g10240 | Os04g0181100 | - | Detail |
| C1H4g30056 | 4:4,184,444-4,189,768 | - | C2H4g14846 | CX4g035099 | LOC_Os04g10260 | Os04g0181300 | - | Detail |
| C1H4g22965 | 4:4,192,377-4,193,801 | + | C2H4g02690 | CX4g035182 | LOC_Os04g10350 | Os04g0181901 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g21442 | 11:685,695-686,040 | + | C1H12g13992 | - | LOC_Os12g02380 | Os11g0116400 | - | Detail |
| C2H11g20016 | 11:686,370-688,199 | + | C1H11g02295 | CX12g018356 | LOC_Os12g02380 | Os11g0116400 | - | Detail |
| C2H11g19381 | 11:686,889-691,961 | - | C1H11g01957 | CX11g013702 | LOC_Os12g02385 | Os11g0116500 | - | Detail |
| C2H11g03044 | 11:692,058-696,590 | - | C1H11g01957 | CX11g012819 | LOC_Os12g02390 | Os11g0116550 | OsVSR3 | Detail |
| C2H11g04265 | 11:698,295-699,588 | - | C1H11g18757 | CX11g012017 | LOC_Os12g02400 | Os12g0116100 | OsWRKY114 | Detail |
| C2H11g05407 | 11:708,771-712,182 | - | C1H12g19347 | CX11g012017 | LOC_Os12g02420 | Os11g0116900 | OsWRKY46 | Detail |
| C2H11g18418 | 11:736,087-737,322 | - | C1H11g22300 | CX11g012017 | LOC_Os12g02450 | Os11g0117500 | - | Detail |
| C2H11g25113 | 11:745,040-746,561 | - | C1H12g31265 | CX11g014260 | LOC_Os12g02470 | Os11g0117600 | OsWRKY50 | Detail |
| C2H11g04264 | 11:751,473-755,739 | - | C1H11g28265 | CX11g011584 | LOC_Os12g02490 | Os11g0117700 | - | Detail |
| C2H11g24535 | 11:759,891-761,032 | + | C1H11g23952 | CX11g013876 | LOC_Os12g02500 | Os11g0117900 | - | Detail |
| C2H11g14396 | 11:764,426-765,792 | - | C1H12g13059 | CX11g011355 | LOC_Os12g02520 | Os11g0118200 | - | Detail |
| C2H11g25137 | 11:766,363-768,647 | - | C1H11g00384 | CX11g014989 | LOC_Os12g02530 | Os11g0118300 | - | Detail |
| C2H11g22359 | 11:770,524-775,003 | - | C1H11g29966 | CX11g014929 | LOC_Os12g02540 | Os11g0118500 | - | Detail |
| C2H11g07467 | 11:793,521-794,004 | - | - | CX11g014866 | - | - | - | Detail |
| C2H11g03806 | 11:793,615-797,355 | + | C1H11g18128 | CX11g014991 | LOC_Os12g02589 | Os11g0119100 | - | Detail |
| C2H11g26784 | 11:799,200-804,432 | + | C1H11g22719 | CX11g013596 | LOC_Os12g02630 | Os11g0119200 | - | Detail |
| C2H11g27402 | 11:811,419-811,637 | - | C1H11g31503 | - | LOC_Os07g35500 | Os07g0539200 | - | Detail |
| C2H11g20690 | 11:811,664-812,580 | - | - | - | - | - | - | Detail |
| C2H11g28825 | 11:822,804-826,403 | - | C1H11g18218 | CX11g013237 | - | - | - | Detail |
| C2H11g22132 | 11:826,772-834,508 | + | C1H11g01198 | CX11g012225 | LOC_Os12g02690 | Os11g0119900 | OsDRB1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |