| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02356 | 1:19,019,653-19,021,674 | - | C2H1g15114 | CX1g004191 | LOC_Os01g37480 | Os01g0555300 | - | Detail |
| C1H1g21947 | 1:19,026,741-19,027,745 | - | C2H1g15561 | CX1g003072 | LOC_Os01g37490 | Os01g0555600 | - | Detail |
| C1H1g23119 | 1:19,030,574-19,031,990 | - | C2H1g11457 | CX1g002456 | LOC_Os01g37510 | Os01g0555800 | OsPDF1A | Detail |
| C1H1g29178 | 1:19,032,323-19,032,873 | - | - | - | - | - | - | Detail |
| C1H1g05920 | 1:19,034,862-19,035,296 | - | - | - | - | - | - | Detail |
| C1H1g10331 | 1:19,040,878-19,043,959 | - | C2H1g24925 | CX1g007105 | - | Os01g0807000 | - | Detail |
| C1H1g31630 | 1:19,047,261-19,051,396 | + | C2H1g29022 | CX1g005274 | LOC_Os01g37560 | Os01g0556400 | - | Detail |
| C1H1g17519 | 1:19,071,315-19,077,214 | + | C2H1g00425 | CX1g006555 | LOC_Os01g37590 | Os01g0556700 | - | Detail |
| C1H1g00158 | 1:19,078,212-19,079,505 | - | C2H1g12776 | CX1g000936 | LOC_Os01g37600 | Os01g0556800 | - | Detail |
| C1H1g06316 | 1:19,103,589-19,104,473 | - | C2H1g21486 | CX1g003371 | LOC_Os01g37630 | Os01g0557100 | - | Detail |
| C1H1g17066 | 1:19,119,599-19,125,230 | - | C2H1g23763 | CX1g000131 | LOC_Os01g37690 | Os01g0557500 | OsCAX1a | Detail |
| C1H1g26457 | 1:19,155,354-19,161,051 | + | C2H1g06830 | CX1g000875 | LOC_Os01g37760 | Os01g0558200 | - | Detail |
| C1H1g06402 | 1:19,161,473-19,164,760 | - | C2H1g08019 | CX1g000488 | LOC_Os01g37770 | Os01g0558300 | - | Detail |
| C1H1g15919 | 1:19,175,780-19,179,619 | + | C2H1g18167 | CX1g001083 | LOC_Os01g37790 | Os01g0558500 | - | Detail |
| C1H1g24378 | 1:19,180,459-19,183,345 | - | C2H1g19481 | CX1g002871 | LOC_Os01g37800 | Os01g0558600 | - | Detail |
| C1H1g26268 | 1:19,189,472-19,192,644 | - | C2H1g02629 | CX1g000094 | LOC_Os01g37820 | Os01g0558800 | - | Detail |
| C1H1g26154 | 1:19,197,719-19,206,072 | + | C2H1g25024 | CX1g002185 | LOC_Os01g37825 | Os01g0558900 | - | Detail |
| C1H1g23221 | 1:19,206,870-19,211,597 | + | C2H1g22293 | CX1g005822 | LOC_Os01g37832 | Os01g0559000 | - | Detail |
| C1H1g29674 | 1:19,215,337-19,219,492 | + | C2H1g19302 | CX1g000202 | LOC_Os01g37837 | Os01g0559100 | - | Detail |
| C1H1g09716 | 1:19,221,125-19,224,008 | + | C2H1g01229 | CX1g007154 | LOC_Os01g37842 | Os01g0559200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g21298 | 5:24,370,851-24,378,723 | + | C1H5g11375 | CX5g040394 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| C2H5g22702 | 5:24,384,080-24,385,033 | + | C1H5g12339 | CX5g040044 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| C2H5g01078 | 5:24,388,586-24,389,818 | - | C1H5g13782 | CX5g040015 | LOC_Os05g50690 | Os05g0583950 | - | Detail |
| C2H5g06430 | 5:24,392,259-24,393,420 | + | C1H5g25754 | CX5g040625 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| C2H5g22409 | 5:24,395,708-24,396,278 | - | C1H5g23722 | CX5g038552 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| C2H5g01350 | 5:24,397,473-24,398,219 | + | C1H5g29939 | CX5g037414 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| C2H5g11315 | 5:24,403,610-24,404,565 | - | C1H5g06457 | CX5g040723 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| C2H5g01570 | 5:24,409,676-24,414,803 | - | C1H5g14305 | CX5g037383 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| C2H5g08711 | 5:24,442,120-24,444,358 | + | C1H5g05102 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C2H5g19125 | 5:24,451,398-24,453,724 | + | C1H5g03901 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C2H5g30392 | 5:24,454,334-24,458,461 | - | C1H5g16468 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C2H5g27655 | 5:24,460,511-24,461,197 | + | C1H5g19912 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C2H5g10246 | 5:24,463,816-24,466,422 | - | C1H5g12424 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C2H5g21671 | 5:24,469,908-24,471,983 | + | C1H5g08867 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C2H5g07511 | 5:24,472,142-24,476,832 | - | C1H5g02224 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C2H5g12537 | 5:24,499,027-24,504,297 | + | C1H5g05725 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C2H5g22033 | 5:24,507,189-24,509,328 | - | C1H5g23433 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C2H5g28495 | 5:24,513,017-24,518,798 | + | C1H5g03676 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C2H5g17335 | 5:24,520,464-24,523,154 | + | C1H5g31726 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C2H5g13829 | 5:24,524,099-24,528,487 | + | C1H5g23972 | CX5g037636 | LOC_Os05g50940 | Os05g0586700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |