| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10229 | 4:3,577,684-3,577,877 | + | - | - | LOC_Os04g08836 | - | - | Detail |
| C1H4g24051 | 4:3,584,279-3,586,466 | + | C2H4g20337 | CX4g034654 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| C1H4g18038 | 4:3,590,351-3,594,946 | + | C2H4g09503 | CX4g033450 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C1H4g07911 | 4:3,604,068-3,604,520 | + | - | - | - | - | - | Detail |
| C1H4g20508 | 4:3,605,693-3,607,000 | - | C2H4g13106 | CX4g031545 | LOC_Os04g09260 | Os04g0172400 | - | Detail |
| C1H4g22697 | 4:3,620,658-3,621,335 | - | C2H4g19448 | CX4g032971 | LOC_Os04g09390 | Os04g0173800 | - | Detail |
| C1H4g22795 | 4:3,634,434-3,635,325 | - | C2H4g16323 | CX4g031393 | LOC_Os09g03190 | Os09g0120033 | - | Detail |
| C1H4g23989 | 4:3,661,405-3,663,925 | - | C2H4g22590 | CX4g034441 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C1H4g13047 | 4:3,679,975-3,681,887 | - | C2H4g26043 | CX4g033229 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C1H4g12448 | 4:3,685,568-3,686,799 | - | C2H4g09296 | CX4g035209 | LOC_Os04g09520 | - | - | Detail |
| C1H4g29255 | 4:3,715,693-3,719,224 | + | C2H4g00337 | CX4g032438 | - | - | - | Detail |
| C1H4g15809 | 4:3,726,385-3,727,878 | - | C2H4g18023 | CX4g033765 | LOC_Os04g09530 | Os04g0174800 | - | Detail |
| C1H4g04587 | 4:3,739,003-3,742,038 | + | C2H4g07222 | CX4g031895 | LOC_Os04g09540 | Os04g0174900 | - | Detail |
| C1H4g23242 | 4:3,757,126-3,757,566 | + | - | CX4g036518 | LOC_Os04g09570 | Os04g0175400 | - | Detail |
| C1H4g04828 | 4:3,767,701-3,769,020 | - | C2H4g13106 | CX4g034555 | LOC_Os04g09590 | Os04g0175500 | - | Detail |
| C1H4g26996 | 4:3,786,208-3,788,878 | + | C2H4g19878 | CX4g033442 | LOC_Os04g09604 | Os04g0175600 | - | Detail |
| C1H4g27776 | 4:3,810,951-3,817,402 | + | C2H4g01777 | CX4g036641 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C1H4g04322 | 4:3,822,889-3,823,776 | + | C2H4g06147 | CX4g031947 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C1H4g25500 | 4:3,826,139-3,827,767 | - | C2H4g04542 | CX4g031947 | LOC_Os04g09670 | Os04g0176200 | - | Detail |
| C1H4g17119 | 4:3,830,157-3,830,702 | - | C2H4g04542 | CX4g031947 | LOC_Os04g09680 | Os04g0176200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22494 | 5:16,642,716-16,645,805 | - | C1H5g26959 | CX5g038106 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| C2H5g11829 | 5:16,655,985-16,661,923 | + | C1H5g04085 | CX5g040922 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| C2H5g25939 | 5:16,663,546-16,666,879 | + | C1H5g22041 | CX5g041090 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| C2H5g22907 | 5:16,667,446-16,671,338 | - | C1H5g10446 | CX5g040421 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| C2H5g21437 | 5:16,686,600-16,698,456 | - | C1H5g00299 | CX5g040140 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| C2H5g07531 | 5:16,713,512-16,714,696 | + | C1H5g09689 | CX5g038444 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| C2H5g01393 | 5:16,717,738-16,718,662 | - | - | CX5g039242 | - | - | - | Detail |
| C2H5g17544 | 5:16,718,825-16,719,860 | + | C1H5g02644 | CX5g040199 | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C2H5g09572 | 5:16,720,279-16,728,625 | - | C1H5g06235 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C2H5g14010 | 5:16,741,952-16,744,658 | + | C1H5g07655 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C2H5g30500 | 5:16,761,498-16,767,214 | - | C1H5g16377 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C2H5g10487 | 5:16,792,590-16,793,159 | + | - | - | - | - | - | Detail |
| C2H5g11444 | 5:16,793,248-16,801,244 | + | C1H5g18086 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C2H5g22366 | 5:16,803,441-16,806,745 | - | C1H5g22231 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C2H5g14510 | 5:16,822,950-16,823,828 | - | C1H5g07753 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C2H5g20401 | 5:16,826,385-16,826,935 | - | C1H5g01736 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C2H5g21665 | 5:16,827,319-16,833,393 | - | C1H5g28806 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C2H5g22578 | 5:16,840,873-16,845,350 | - | C1H5g13458 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C2H5g22810 | 5:16,848,921-16,849,907 | + | C1H5g23907 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C2H5g14027 | 5:16,857,988-16,859,428 | + | C1H5g25708 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |