| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09325 | 4:1,638,294-1,640,327 | - | C2H4g29753 | CX4g036540 | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| C1H4g24046 | 4:1,641,510-1,642,004 | - | - | CX4g032974 | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| C1H4g10673 | 4:1,656,966-1,658,423 | + | - | CX4g034537 | LOC_Os04g04100 | - | - | Detail |
| C1H4g20023 | 4:1,719,955-1,720,560 | + | C2H4g04395 | - | LOC_Os04g04230 | Os04g0131800 | - | Detail |
| C1H4g20239 | 4:1,722,093-1,729,360 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g25848 | 4:1,737,417-1,749,711 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g18623 | 4:1,753,592-1,753,955 | - | C2H4g06971 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g04462 | 4:1,762,452-1,768,721 | + | C2H4g08446 | CX4g033436 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| C1H4g17799 | 4:1,778,796-1,783,507 | + | C2H4g30640 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C1H4g19447 | 4:1,799,060-1,799,641 | - | C2H4g19144 | CX4g034832 | - | - | - | Detail |
| C1H4g14310 | 4:1,806,840-1,807,794 | - | - | CX4g034477 | - | - | - | Detail |
| C1H4g23533 | 4:1,832,950-1,836,850 | + | C2H4g05610 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C1H4g07028 | 4:1,861,368-1,870,740 | + | C2H4g08696 | CX4g032198 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g23122 | 4:1,908,961-1,909,862 | + | C2H4g09916 | CX4g034389 | LOC_Os04g04690 | Os04g0123800 | - | Detail |
| C1H4g13170 | 4:1,915,132-1,916,706 | + | C2H4g08696 | CX4g035554 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g11470 | 4:1,927,614-1,933,541 | - | C2H4g11644 | CX2g022606 | LOC_Os04g04950 | Os04g0136200 | - | Detail |
| C1H4g23677 | 4:1,939,940-1,940,300 | - | C2H4g00094 | CX4g033097 | LOC_Os12g23430 | - | - | Detail |
| C1H4g22739 | 4:1,940,890-1,942,034 | - | C2H4g14390 | CX4g033097 | LOC_Os12g23400 | - | - | Detail |
| C1H4g01991 | 4:1,945,350-1,946,200 | - | - | - | - | - | - | Detail |
| C1H4g23277 | 4:1,948,307-1,950,580 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g02287 | 7:3,630,481-3,630,876 | + | C1H7g09786 | CX7g046457 | LOC_Os07g07790 | Os07g0174400 | - | Detail |
| C2H7g29174 | 7:3,633,451-3,637,381 | - | C1H7g03963 | CX7g048042 | - | Os07g0631500 | - | Detail |
| C2H7g03950 | 7:3,637,491-3,638,207 | + | - | CX7g048263 | - | - | - | Detail |
| C2H7g05323 | 7:3,638,268-3,639,828 | + | C1H7g11903 | CX7g048316 | - | Os07g0577400 | OsCOP10 | Detail |
| C2H7g20911 | 7:3,639,999-3,640,916 | + | C1H7g03174 | CX7g050345 | LOC_Os07g07820 | Os07g0174700 | - | Detail |
| C2H7g20305 | 7:3,645,019-3,646,062 | - | C1H7g03041 | - | - | Os07g0174766 | - | Detail |
| C2H7g11292 | 7:3,657,580-3,658,726 | - | C1H7g15766 | CX7g049495 | LOC_Os07g07860 | Os07g0174900 | - | Detail |
| C2H7g16926 | 7:3,661,639-3,662,796 | + | C1H7g00850 | CX7g046117 | LOC_Os07g07870 | Os07g0175000 | - | Detail |
| C2H7g10004 | 7:3,664,268-3,665,691 | - | C1H7g08859 | CX7g049148 | LOC_Os07g07880 | Os07g0175100 | POW1 | Detail |
| C2H7g01222 | 7:3,671,366-3,671,590 | + | - | CX7g049830 | LOC_Os07g07890 | Os07g0175200 | - | Detail |
| C2H7g17092 | 7:3,672,430-3,674,136 | - | C1H7g05106 | CX7g046841 | LOC_Os07g07900 | Os07g0175300 | POST | Detail |
| C2H7g05371 | 7:3,683,177-3,685,846 | + | C1H7g15384 | CX7g048003 | LOC_Os07g05560 | Os07g0150000 | - | Detail |
| C2H7g21726 | 7:3,687,613-3,692,732 | + | C1H7g22074 | CX7g047208 | LOC_Os07g07910 | Os07g0175400 | - | Detail |
| C2H7g02419 | 7:3,693,549-3,694,915 | + | C1H7g12789 | CX7g046140 | LOC_Os07g07920 | Os07g0175500 | - | Detail |
| C2H7g24629 | 7:3,697,296-3,698,289 | + | C1H7g31526 | CX7g050173 | LOC_Os07g07930 | Os07g0175600 | - | Detail |
| C2H7g09985 | 7:3,710,314-3,715,439 | - | C1H7g05254 | CX7g046372 | LOC_Os07g07950 | Os07g0175900 | - | Detail |
| C2H7g03134 | 7:3,740,509-3,740,808 | + | C1H7g20297 | - | - | - | - | Detail |
| C2H7g13269 | 7:3,740,845-3,745,560 | + | C1H7g20297 | CX7g049173 | LOC_Os07g07974 | Os07g0176200 | - | Detail |
| C2H7g21239 | 7:3,747,911-3,749,044 | - | C1H7g21805 | CX7g046340 | LOC_Os07g07990 | Os07g0176500 | - | Detail |
| C2H7g07614 | 7:3,764,959-3,768,760 | + | C1H7g03984 | CX7g050295 | LOC_Os07g08000 | Os07g0176600 | OsNek3, OsSTA192 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |