| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16330 | 3:33,552,540-33,557,647 | + | C2H3g08868 | CX3g030691 | LOC_Os03g64250 | Os03g0860000 | - | Detail |
| C1H3g08606 | 3:33,565,584-33,581,864 | - | C2H3g04480 | CX3g027910 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| C1H3g27781 | 3:33,586,510-33,592,811 | + | C2H3g22239 | CX3g029996 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| C1H3g04412 | 3:33,593,879-33,604,834 | + | C2H3g11459 | CX3g027284 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| C1H3g04119 | 3:33,612,242-33,613,617 | - | C2H3g16452 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C1H3g17429 | 3:33,619,949-33,625,103 | - | C2H3g12472 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C1H3g24824 | 3:33,625,267-33,628,020 | + | C2H3g08959 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C1H3g08341 | 3:33,638,279-33,645,157 | + | C2H3g16629 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C1H4g00861 | 4:16,416-19,947 | + | C2H4g13233 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C1H4g16035 | 4:16,510-18,252 | - | C2H4g12191 | - | - | - | - | Detail |
| C1H4g09455 | 4:39,781-40,005 | - | C2H12g12031 | CX4g034444 | LOC_Os02g17030 | - | - | Detail |
| C1H4g03520 | 4:42,032-50,044 | + | C2H4g17137 | CX4g036339 | LOC_Os08g33280 | - | - | Detail |
| C1H4g00970 | 4:97,742-106,695 | + | C2H4g05647 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C1H4g04170 | 4:108,701-110,550 | - | C2H4g16448 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| C1H4g21331 | 4:124,561-127,342 | + | C2H4g17331 | CX4g033419 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| C1H4g00085 | 4:129,761-132,613 | - | C2H4g10066 | CX4g031572 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| C1H4g29729 | 4:176,858-177,094 | + | C2H4g10312 | - | - | - | - | Detail |
| C1H4g11244 | 4:177,315-182,878 | + | C2H4g18592 | CX4g036467 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| C1H4g30914 | 4:183,184-187,055 | - | C2H4g15768 | CX4g033514 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| C1H4g22444 | 4:188,075-197,428 | - | C2H4g26141 | CX4g035629 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24841 | 2:4,466,333-4,473,590 | + | C1H2g06273 | - | - | - | - | Detail |
| C2H2g02506 | 2:4,467,459-4,475,507 | - | C1H2g06467 | CX2g022600 | LOC_Os02g09720 | Os02g0189800 | - | Detail |
| C2H2g14951 | 2:4,478,174-4,480,674 | - | C1H2g01542 | - | - | - | - | Detail |
| C2H2g30372 | 2:4,496,908-4,505,951 | + | C1H2g30083 | - | - | Os02g0189900 | - | Detail |
| C2H2g18329 | 2:4,499,651-4,501,987 | - | C1H2g16474 | CX2g021632 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g16945 | 2:4,505,076-4,507,325 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g22278 | 2:4,513,353-4,514,216 | + | C1H2g07631 | - | LOC_Os02g09710 | Os02g0190100 | - | Detail |
| C2H2g08799 | 2:4,514,878-4,515,210 | - | C1H2g15671 | CX2g022648 | - | - | - | Detail |
| C2H2g23933 | 2:4,518,660-4,528,120 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190300 | - | Detail |
| C2H2g06769 | 2:4,552,603-4,558,573 | + | C1H2g21943 | CX2g022054 | LOC_Os02g09740 | Os02g0190500 | - | Detail |
| C2H2g16178 | 2:4,564,198-4,564,776 | - | C1H2g15779 | CX2g023142 | LOC_Os02g09760 | Os02g0190700 | - | Detail |
| C2H2g05420 | 2:4,572,781-4,576,587 | - | C1H2g04808 | CX2g021348 | LOC_Os02g09770 | Os02g0190800 | - | Detail |
| C2H2g18343 | 2:4,578,985-4,580,410 | - | C1H2g13385 | CX2g020459 | LOC_Os02g09780 | Os02g0190900 | - | Detail |
| C2H2g21825 | 2:4,600,410-4,600,900 | - | - | - | - | Os02g0191250 | - | Detail |
| C2H2g19527 | 2:4,605,121-4,608,898 | - | C1H2g16598 | CX2g019369 | LOC_Os02g09810 | Os02g0191300 | OsATL6 | Detail |
| C2H2g07551 | 2:4,611,094-4,613,404 | + | C1H2g02472 | CX2g021648 | LOC_Os02g09820 | Os02g0191500 | - | Detail |
| C2H2g25953 | 2:4,619,166-4,622,606 | - | C1H2g12750 | CX2g024871 | LOC_Os02g09840 | Os02g0191700 | - | Detail |
| C2H2g20717 | 2:4,671,796-4,674,961 | - | C1H2g08390 | CX2g018975 | LOC_Os02g09890 | Os02g0192100 | - | Detail |
| C2H2g09261 | 2:4,674,811-4,680,161 | + | C1H2g01762 | - | - | - | - | Detail |
| C2H2g06391 | 2:4,689,950-4,701,925 | + | C1H2g02906 | CX2g023082 | LOC_Os02g09920 | Os02g0192400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |