| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16330 | 3:33,552,540-33,557,647 | + | C2H3g08868 | CX3g030691 | LOC_Os03g64250 | Os03g0860000 | - | Detail |
| C1H3g08606 | 3:33,565,584-33,581,864 | - | C2H3g04480 | CX3g027910 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| C1H3g27781 | 3:33,586,510-33,592,811 | + | C2H3g22239 | CX3g029996 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| C1H3g04412 | 3:33,593,879-33,604,834 | + | C2H3g11459 | CX3g027284 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| C1H3g04119 | 3:33,612,242-33,613,617 | - | C2H3g16452 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C1H3g17429 | 3:33,619,949-33,625,103 | - | C2H3g12472 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C1H3g24824 | 3:33,625,267-33,628,020 | + | C2H3g08959 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C1H3g08341 | 3:33,638,279-33,645,157 | + | C2H3g16629 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C1H4g00861 | 4:16,416-19,947 | + | C2H4g13233 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C1H4g16035 | 4:16,510-18,252 | - | C2H4g12191 | - | - | - | - | Detail |
| C1H4g09455 | 4:39,781-40,005 | - | C2H12g12031 | CX4g034444 | LOC_Os02g17030 | - | - | Detail |
| C1H4g03520 | 4:42,032-50,044 | + | C2H4g17137 | CX4g036339 | LOC_Os08g33280 | - | - | Detail |
| C1H4g00970 | 4:97,742-106,695 | + | C2H4g05647 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C1H4g04170 | 4:108,701-110,550 | - | C2H4g16448 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| C1H4g21331 | 4:124,561-127,342 | + | C2H4g17331 | CX4g033419 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| C1H4g00085 | 4:129,761-132,613 | - | C2H4g10066 | CX4g031572 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| C1H4g29729 | 4:176,858-177,094 | + | C2H4g10312 | - | - | - | - | Detail |
| C1H4g11244 | 4:177,315-182,878 | + | C2H4g18592 | CX4g036467 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| C1H4g30914 | 4:183,184-187,055 | - | C2H4g15768 | CX4g033514 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| C1H4g22444 | 4:188,075-197,428 | - | C2H4g26141 | CX4g035629 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g29395 | 7:14,798,176-14,799,231 | - | - | - | LOC_Os07g30640 | Os07g0489500 | - | Detail |
| C2H7g10334 | 7:14,802,406-14,804,002 | + | C1H7g29303 | CX7g047438 | LOC_Os07g30670 | Os07g0489800 | - | Detail |
| C2H7g12622 | 7:14,831,606-14,831,988 | + | C1H7g04105 | - | LOC_Os07g30700 | - | - | Detail |
| C2H7g08824 | 7:14,832,043-14,833,485 | + | C1H7g11548 | CX7g048524 | LOC_Os07g30760 | Os07g0490100 | - | Detail |
| C2H7g09498 | 7:14,833,829-14,843,229 | - | C1H7g05364 | CX7g048360 | LOC_Os07g30774 | Os07g0490200 | - | Detail |
| C2H7g20192 | 7:14,848,250-14,853,781 | - | C1H7g11282 | CX7g049552 | LOC_Os07g30790 | Os07g0490300 | - | Detail |
| C2H7g03971 | 7:14,853,921-14,857,518 | + | C1H7g00251 | CX7g049122 | LOC_Os07g30800 | Os07g0490400 | - | Detail |
| C2H7g25617 | 7:14,861,743-14,867,266 | + | C1H7g29765 | CX7g047045 | LOC_Os07g30810 | Os07g0490500 | - | Detail |
| C2H7g04013 | 7:14,867,658-14,871,385 | - | C1H7g22378 | CX7g046049 | LOC_Os07g30820 | Os07g0490600 | - | Detail |
| C2H7g06260 | 7:14,885,538-14,886,872 | + | C1H7g16106 | CX7g050059 | LOC_Os07g30830 | Os07g0490700 | - | Detail |
| C2H7g11164 | 7:14,888,218-14,892,491 | - | C1H7g31679 | CX7g047742 | LOC_Os07g30840 | Os07g0490800 | - | Detail |
| C2H7g16219 | 7:14,904,186-14,905,094 | + | - | - | LOC_Os07g30860 | - | - | Detail |
| C2H7g28062 | 7:14,905,522-14,907,024 | + | - | - | LOC_Os07g30860 | - | - | Detail |
| C2H7g23888 | 7:14,922,398-14,930,396 | + | C1H7g28984 | CX7g048274 | LOC_Os07g30940 | Os07g0491600 | - | Detail |
| C2H7g13894 | 7:14,938,276-14,939,806 | - | C1H7g20987 | CX7g050146 | LOC_Os07g30960 | Os07g0491900 | - | Detail |
| C2H7g10051 | 7:14,939,830-14,940,243 | - | C1H7g12625 | CX7g050146 | - | - | - | Detail |
| C2H7g25121 | 7:14,941,617-14,943,679 | - | C1H7g17892 | CX7g046351 | LOC_Os07g30970 | Os07g0492000 | OsNDPK1 | Detail |
| C2H7g15297 | 7:14,945,589-14,958,483 | - | C1H7g14840 | CX7g046009 | LOC_Os07g30980 | Os07g0492100 | OsUvrD | Detail |
| C2H7g09320 | 7:14,960,246-14,960,556 | + | C1H7g29201 | - | LOC_Os07g30990 | Os07g0492200 | - | Detail |
| C2H7g13521 | 7:14,972,719-14,974,122 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |