| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g14280 | 3:33,371,373-33,372,488 | + | C2H3g28127 | CX3g029132 | LOC_Os03g63850 | Os03g0855500 | - | Detail |
| C1H3g01539 | 3:33,373,239-33,376,666 | + | C2H3g23266 | CX3g027978 | LOC_Os03g63860 | Os03g0855600 | - | Detail |
| C1H3g10625 | 3:33,384,084-33,385,187 | + | C2H3g09898 | CX3g027688 | LOC_Os03g63900 | Os03g0856000 | - | Detail |
| C1H3g25641 | 3:33,389,020-33,391,137 | + | C2H3g04375 | CX3g031335 | LOC_Os03g63910 | Os03g0856100 | - | Detail |
| C1H3g17906 | 3:33,391,850-33,400,353 | + | - | CX3g030971 | LOC_Os03g63920 | Os03g0856200 | OsKu80 | Detail |
| C1H3g22746 | 3:33,400,650-33,402,681 | - | C2H3g28643 | CX3g030579 | LOC_Os03g63930 | Os03g0856300 | - | Detail |
| C1H3g30692 | 3:33,405,209-33,415,067 | + | C2H3g16257 | CX3g028093 | LOC_Os03g63940 | Os03g0856400 | - | Detail |
| C1H3g20639 | 3:33,442,420-33,445,049 | - | C2H3g11890 | CX3g029621 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| C1H3g22114 | 3:33,446,685-33,448,229 | - | C2H3g15877 | CX3g025931 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| C1H3g29403 | 3:33,464,995-33,475,412 | - | C2H3g02920 | CX3g027831 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| C1H3g01357 | 3:33,477,017-33,477,436 | - | C2H3g25733 | CX3g026648 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| C1H3g08857 | 3:33,481,213-33,485,480 | + | C2H3g02150 | CX3g030847 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| C1H3g16247 | 3:33,494,539-33,496,100 | - | C2H3g17790 | CX3g029022 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| C1H3g22606 | 3:33,510,675-33,511,508 | - | C2H3g13548 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C1H3g08104 | 3:33,512,368-33,513,602 | - | C2H3g20836 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C1H3g07086 | 3:33,520,116-33,526,348 | - | C2H3g16125 | CX3g031056 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| C1H3g08038 | 3:33,528,463-33,533,573 | - | C2H3g24116 | CX3g029460 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| C1H3g08107 | 3:33,536,438-33,539,902 | - | C2H3g24534 | CX3g028741 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| C1H3g16052 | 3:33,542,137-33,544,808 | - | C2H3g16421 | CX3g027116 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| C1H3g15087 | 3:33,549,229-33,552,069 | + | C2H3g04803 | CX3g027684 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g16127 | 10:19,714,317-19,718,581 | + | - | - | - | - | - | Detail |
| C2H10g21795 | 10:19,723,016-19,723,748 | - | - | - | - | - | - | Detail |
| C2H10g03378 | 10:19,723,909-19,724,781 | - | - | CX10g009910 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| C2H10g02267 | 10:19,731,943-19,737,400 | + | C1H10g18964 | CX10g007550 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| C2H10g07153 | 10:19,738,712-19,744,037 | - | C1H10g16439 | CX10g009390 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| C2H10g19889 | 10:19,757,452-19,759,520 | - | C1H10g00556 | CX10g008553 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| C2H10g18300 | 10:19,762,068-19,762,574 | + | C1H10g19113 | - | LOC_Os10g40614 | Os10g0552700 | - | Detail |
| C2H10g14918 | 10:19,763,633-19,766,081 | - | C1H10g29784 | CX10g010159 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| C2H10g03186 | 10:19,776,793-19,779,963 | + | C1H10g17774 | CX10g008244 | LOC_Os10g40640 | Os10g0555100 | OsGGT | Detail |
| C2H10g17492 | 10:19,780,579-19,782,118 | - | C1H10g15921 | CX10g007995 | LOC_Os10g40650 | Os10g0555200 | - | Detail |
| C2H10g25195 | 10:19,787,598-19,788,680 | - | - | CX10g008856 | LOC_Os10g40660 | Os10g0555300 | - | Detail |
| C2H10g04919 | 10:19,806,433-19,807,549 | - | C1H10g19120 | CX10g007989 | LOC_Os10g40700 | Os10g0555600 | - | Detail |
| C2H10g20347 | 10:19,812,275-19,813,512 | - | C1H10g16993 | CX10g007911 | LOC_Os10g40710 | Os10g0555700 | OsEXPB2 | Detail |
| C2H10g20545 | 10:19,825,862-19,827,776 | - | C1H10g15903 | CX10g010453 | LOC_Os10g40720 | Os10g0555900 | OsEXPB3 | Detail |
| C2H10g17527 | 10:19,839,684-19,842,118 | + | C1H10g31280 | CX10g008461 | LOC_Os10g40730 | Os10g0556100 | - | Detail |
| C2H10g17829 | 10:19,845,427-19,849,262 | - | C1H10g11805 | CX10g009492 | LOC_Os10g40740 | Os10g0556200 | - | Detail |
| C2H10g30183 | 10:19,857,549-19,858,001 | + | - | - | - | Os10g0556500 | - | Detail |
| C2H10g14014 | 10:19,860,719-19,879,904 | - | C1H10g29962 | CX10g008043 | LOC_Os10g40780 | Os10g0556700 | OsNOT1 | Detail |
| C2H10g09074 | 10:19,897,157-19,898,524 | + | C1H10g24304 | CX10g010658 | LOC_Os10g40810 | Os10g0557600 | OsGATA7 | Detail |
| C2H10g12261 | 10:19,905,567-19,906,652 | - | C1H10g12942 | CX10g010083 | LOC_Os10g40830 | Os10g0557900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |