| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g14280 | 3:33,371,373-33,372,488 | + | C2H3g28127 | CX3g029132 | LOC_Os03g63850 | Os03g0855500 | - | Detail |
| C1H3g01539 | 3:33,373,239-33,376,666 | + | C2H3g23266 | CX3g027978 | LOC_Os03g63860 | Os03g0855600 | - | Detail |
| C1H3g10625 | 3:33,384,084-33,385,187 | + | C2H3g09898 | CX3g027688 | LOC_Os03g63900 | Os03g0856000 | - | Detail |
| C1H3g25641 | 3:33,389,020-33,391,137 | + | C2H3g04375 | CX3g031335 | LOC_Os03g63910 | Os03g0856100 | - | Detail |
| C1H3g17906 | 3:33,391,850-33,400,353 | + | - | CX3g030971 | LOC_Os03g63920 | Os03g0856200 | OsKu80 | Detail |
| C1H3g22746 | 3:33,400,650-33,402,681 | - | C2H3g28643 | CX3g030579 | LOC_Os03g63930 | Os03g0856300 | - | Detail |
| C1H3g30692 | 3:33,405,209-33,415,067 | + | C2H3g16257 | CX3g028093 | LOC_Os03g63940 | Os03g0856400 | - | Detail |
| C1H3g20639 | 3:33,442,420-33,445,049 | - | C2H3g11890 | CX3g029621 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| C1H3g22114 | 3:33,446,685-33,448,229 | - | C2H3g15877 | CX3g025931 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| C1H3g29403 | 3:33,464,995-33,475,412 | - | C2H3g02920 | CX3g027831 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| C1H3g01357 | 3:33,477,017-33,477,436 | - | C2H3g25733 | CX3g026648 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| C1H3g08857 | 3:33,481,213-33,485,480 | + | C2H3g02150 | CX3g030847 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| C1H3g16247 | 3:33,494,539-33,496,100 | - | C2H3g17790 | CX3g029022 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| C1H3g22606 | 3:33,510,675-33,511,508 | - | C2H3g13548 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C1H3g08104 | 3:33,512,368-33,513,602 | - | C2H3g20836 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C1H3g07086 | 3:33,520,116-33,526,348 | - | C2H3g16125 | CX3g031056 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| C1H3g08038 | 3:33,528,463-33,533,573 | - | C2H3g24116 | CX3g029460 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| C1H3g08107 | 3:33,536,438-33,539,902 | - | C2H3g24534 | CX3g028741 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| C1H3g16052 | 3:33,542,137-33,544,808 | - | C2H3g16421 | CX3g027116 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| C1H3g15087 | 3:33,549,229-33,552,069 | + | C2H3g04803 | CX3g027684 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g26495 | 6:25,202,621-25,204,454 | - | C1H6g30487 | CX6g042996 | LOC_Os02g06450 | - | - | Detail |
| C2H6g22763 | 6:25,206,905-25,210,727 | - | C1H6g23095 | CX6g043952 | LOC_Os06g47250 | Os06g0687000 | - | Detail |
| C2H6g29052 | 6:25,214,941-25,216,020 | + | C1H6g08187 | CX6g041420 | LOC_Os06g47260 | Os06g0687100 | - | Detail |
| C2H6g16561 | 6:25,216,616-25,217,710 | + | C1H6g07946 | CX6g043467 | LOC_Os06g47270 | Os06g0687200 | OsDIRP1 | Detail |
| C2H6g00336 | 6:25,221,578-25,225,912 | - | C1H6g16897 | CX6g044027 | LOC_Os06g47290 | Os06g0687400 | - | Detail |
| C2H6g20702 | 6:25,226,834-25,231,055 | - | C1H6g27517 | CX6g045285 | LOC_Os06g47294 | Os06g0687450 | - | Detail |
| C2H6g29325 | 6:25,232,588-25,237,540 | + | C1H6g00586 | CX6g041285 | LOC_Os06g47300 | Os06g0687500 | - | Detail |
| C2H6g00459 | 6:25,241,895-25,242,635 | + | C1H6g22446 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C2H6g12967 | 6:25,242,745-25,242,993 | + | C1H6g22446 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C2H6g20319 | 6:25,244,832-25,249,844 | - | C1H6g04180 | CX6g044832 | LOC_Os06g47320 | Os06g0687700 | - | Detail |
| C2H6g13915 | 6:25,251,681-25,256,636 | + | C1H6g10591 | CX6g045256 | LOC_Os06g47330 | Os06g0687800 | - | Detail |
| C2H6g24879 | 6:25,258,124-25,261,403 | + | C1H6g18505 | CX6g045563 | LOC_Os06g47340 | Os06g0687900 | OsIRX14, OsGT43J, OsGT43J/OsIRX14 | Detail |
| C2H6g23849 | 6:25,262,582-25,269,426 | + | C1H6g04786 | CX6g044139 | LOC_Os06g47350 | Os06g0688100 | - | Detail |
| C2H6g01192 | 6:25,270,676-25,271,989 | - | C1H6g31053 | CX6g042228 | LOC_Os06g47360 | Os06g0688200 | - | Detail |
| C2H6g29128 | 6:25,294,243-25,294,794 | - | C1H6g31053 | CX6g041739 | LOC_Os06g47390 | Os06g0688200 | - | Detail |
| C2H6g10086 | 6:25,336,834-25,341,383 | - | C1H6g06587 | CX6g042739 | LOC_Os06g47470 | Os06g0689600 | OsRLCK214 | Detail |
| C2H6g09447 | 6:25,350,081-25,359,051 | - | C1H6g27899 | CX6g043799 | LOC_Os06g47550 | Os06g0690700 | - | Detail |
| C2H6g12873 | 6:25,367,544-25,376,936 | - | C1H6g12422 | CX6g044055 | LOC_Os06g47580 | Os06g0691000 | - | Detail |
| C2H6g11819 | 6:25,392,736-25,398,529 | - | C1H6g21113 | CX6g041351 | LOC_Os06g47620 | Os06g0691400 | OsAH7 | Detail |
| C2H6g10551 | 6:25,405,865-25,406,689 | + | C1H6g30046 | CX6g042548 | LOC_Os06g47630 | Os06g0691500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |