| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g09189 | 3:33,002,790-33,008,902 | + | C2H3g14850 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C1H3g04796 | 3:33,012,472-33,015,587 | - | C2H3g09934 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C1H3g08823 | 3:33,016,070-33,017,510 | - | C2H3g04637 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C1H3g29234 | 3:33,018,831-33,022,598 | - | C2H3g26108 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C1H3g31847 | 3:33,023,412-33,023,972 | + | C2H3g24255 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C1H3g01054 | 3:33,024,826-33,033,780 | - | C2H3g26469 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C1H3g13526 | 3:33,034,511-33,036,781 | - | C2H3g09183 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| C1H3g30582 | 3:33,037,842-33,039,542 | - | C2H3g07934 | CX3g028167 | LOC_Os03g62870 | Os03g0845700 | - | Detail |
| C1H3g07662 | 3:33,042,978-33,047,946 | + | C2H3g13863 | CX3g025569 | LOC_Os03g63020 | Os03g0847600 | - | Detail |
| C1H3g18227 | 3:33,056,349-33,061,777 | + | C2H3g03465 | CX3g030304 | LOC_Os03g63040 | Os03g0847800 | - | Detail |
| C1H3g18477 | 3:33,068,587-33,069,191 | + | C2H3g04348 | CX3g027249 | LOC_Os03g63060 | Os03g0847900 | - | Detail |
| C1H3g04389 | 3:33,071,711-33,075,041 | - | C2H3g21474 | CX3g030785 | LOC_Os03g63074 | Os03g0848100 | - | Detail |
| C1H3g15296 | 3:33,075,988-33,078,517 | - | C2H3g05478 | CX3g028645 | LOC_Os03g63074 | Os03g0848200 | OsPHY1 | Detail |
| C1H3g03652 | 3:33,080,148-33,083,172 | + | C2H3g28774 | CX3g026033 | LOC_Os03g63090 | Os03g0848300 | - | Detail |
| C1H3g28105 | 3:33,084,108-33,087,157 | - | C2H3g19380 | CX3g025110 | LOC_Os03g63110 | Os03g0848400 | - | Detail |
| C1H3g31410 | 3:33,089,112-33,091,789 | + | C2H3g29526 | CX3g025723 | LOC_Os03g63140 | Os03g0848600 | - | Detail |
| C1H3g23775 | 3:33,093,392-33,099,498 | - | C2H3g03590 | CX3g030365 | LOC_Os03g63240 | Os03g0849500 | - | Detail |
| C1H3g19612 | 3:33,101,925-33,107,579 | - | C2H3g13329 | CX3g026100 | LOC_Os03g63250 | Os03g0849600 | - | Detail |
| C1H3g10745 | 3:33,110,854-33,112,905 | + | C2H3g05145 | CX3g026065 | LOC_Os03g63260 | Os03g0849700 | - | Detail |
| C1H3g31123 | 3:33,110,962-33,111,215 | - | - | - | - | Os03g0849750 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16936 | 6:26,305,257-26,309,460 | + | C1H6g07579 | CX6g044738 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| C2H6g07496 | 6:26,318,632-26,320,509 | - | C1H6g14791 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C2H6g02584 | 6:26,323,425-26,330,572 | + | C1H6g07781 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C2H6g28355 | 6:26,330,394-26,332,385 | - | C1H6g30332 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C2H6g09646 | 6:26,340,773-26,345,257 | - | C1H6g20503 | CX6g043432 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| C2H6g02972 | 6:26,358,873-26,363,396 | - | C1H6g28599 | CX6g043180 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| C2H6g12364 | 6:26,373,194-26,381,115 | - | C1H6g28599 | CX6g043432 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C2H6g06456 | 6:26,381,954-26,383,389 | - | C1H6g18704 | - | - | - | - | Detail |
| C2H6g06263 | 6:26,385,335-26,390,272 | + | C1H6g17358 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C2H6g00786 | 6:26,391,339-26,397,254 | - | C1H6g07108 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C2H6g22817 | 6:26,397,559-26,403,996 | + | C1H6g25506 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C2H6g13876 | 6:26,404,653-26,406,561 | + | C1H6g16157 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C2H6g01779 | 6:26,407,653-26,409,481 | + | C1H6g26774 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| C2H6g06908 | 6:26,410,614-26,413,172 | + | C1H6g04243 | CX6g042472 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| C2H6g01327 | 6:26,415,715-26,418,824 | - | C1H6g00335 | CX6g043514 | LOC_Os06g49500 | Os06g0708700 | - | Detail |
| C2H6g14145 | 6:26,425,696-26,431,947 | - | C1H6g23362 | CX6g044369 | LOC_Os06g49505 | Os06g0708832 | - | Detail |
| C2H6g21552 | 6:26,432,605-26,433,753 | + | C1H6g28139 | CX6g045386 | LOC_Os06g49520 | Os06g0709000 | - | Detail |
| C2H6g27299 | 6:26,434,434-26,437,295 | + | C1H6g23498 | CX6g043825 | LOC_Os06g49530 | Os06g0709100 | - | Detail |
| C2H6g19038 | 6:26,437,837-26,440,071 | - | C1H6g20666 | CX6g044020 | LOC_Os06g49550 | Os06g0597800 | - | Detail |
| C2H6g21852 | 6:26,450,253-26,451,402 | - | C1H6g12428 | CX6g041405 | LOC_Os06g49640 | Os06g0710300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |