| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g25165 | 3:32,885,686-32,887,588 | - | C2H3g20263 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C1H3g04020 | 3:32,888,463-32,894,599 | - | C2H3g22865 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C1H3g13920 | 3:32,895,949-32,901,260 | - | C2H3g23885 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C1H3g00003 | 3:32,917,162-32,920,136 | + | C2H3g18445 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C1H3g05358 | 3:32,921,424-32,923,180 | - | C2H3g22112 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C1H3g18020 | 3:32,925,256-32,926,614 | - | C2H3g14550 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| C1H3g24850 | 3:32,928,738-32,932,739 | + | C2H3g06127 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C1H3g01007 | 3:32,933,006-32,935,436 | - | C2H3g01988 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C1H3g21046 | 3:32,935,712-32,937,240 | + | C2H3g11755 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C1H3g08743 | 3:32,937,686-32,943,657 | - | C2H3g01237 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C1H3g28947 | 3:32,944,618-32,952,053 | + | C2H3g27702 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C1H3g22971 | 3:32,953,532-32,957,757 | + | C2H3g20877 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C1H3g08128 | 3:32,958,528-32,959,671 | + | C2H3g21220 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C1H3g30449 | 3:32,960,840-32,964,567 | - | C2H3g22425 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C1H3g17557 | 3:32,964,924-32,966,813 | + | C2H3g21394 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C1H3g06046 | 3:32,967,135-32,970,461 | + | C2H3g07789 | CX3g027520 | LOC_Os03g62910 | Os03g0846400 | - | Detail |
| C1H3g24479 | 3:32,975,508-32,981,063 | - | C2H3g22805 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C1H3g13171 | 3:32,983,327-32,986,507 | + | C2H3g19054 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C1H3g03440 | 3:32,987,871-32,992,536 | + | C2H3g29284 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C1H3g17919 | 3:32,992,851-32,995,861 | - | C2H3g07021 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g06237 | 9:18,925,107-18,925,408 | + | - | - | - | - | - | Detail |
| C2H9g10035 | 9:18,934,167-18,937,352 | + | C1H9g23848 | CX9g054964 | LOC_Os09g38690 | Os09g0559800 | - | Detail |
| C2H9g14153 | 9:18,937,840-18,942,492 | + | C1H9g29424 | CX9g056386 | LOC_Os09g38700 | Os09g0559900 | - | Detail |
| C2H9g30091 | 9:18,942,853-18,948,231 | - | C1H9g13760 | CX9g056090 | LOC_Os09g38710 | Os09g0560000 | - | Detail |
| C2H9g03510 | 9:18,949,833-18,953,719 | + | C1H9g27267 | CX9g058051 | LOC_Os09g38720 | Os09g0560100 | - | Detail |
| C2H9g12252 | 9:18,953,749-18,954,173 | - | C1H9g15569 | CX9g056999 | - | Os09g0560150 | - | Detail |
| C2H9g00285 | 9:18,956,318-18,958,087 | - | C1H9g20526 | CX9g056539 | LOC_Os09g38740 | Os09g0560300 | - | Detail |
| C2H9g11187 | 9:18,959,157-18,962,136 | - | C1H9g16516 | CX9g056989 | LOC_Os09g38750 | Os09g0560400 | - | Detail |
| C2H9g11268 | 9:18,962,385-18,965,848 | + | C1H9g03926 | CX9g056436 | LOC_Os09g38755 | Os09g0560450 | - | Detail |
| C2H9g20950 | 9:18,966,910-18,967,968 | + | C1H9g25922 | CX9g057721 | LOC_Os09g38759 | Os09g0560500 | - | Detail |
| C2H9g17838 | 9:18,968,669-18,970,902 | + | C1H9g27653 | CX9g054913 | LOC_Os09g38768 | Os09g0560600 | - | Detail |
| C2H9g22121 | 9:18,971,683-18,974,123 | + | C1H9g00606 | CX9g055954 | LOC_Os09g38772 | Os09g0560700 | - | Detail |
| C2H9g11291 | 9:18,975,149-18,977,786 | + | C1H9g02125 | CX9g055954 | LOC_Os09g38777 | Os09g0560800 | - | Detail |
| C2H9g18757 | 9:18,977,761-18,985,158 | - | C1H9g29491 | CX9g056926 | LOC_Os09g38790 | Os09g0560900 | SIP1 | Detail |
| C2H9g00048 | 9:18,985,792-18,988,802 | + | C1H9g03389 | CX9g056386 | LOC_Os09g38800 | Os09g0561000 | - | Detail |
| C2H9g28628 | 9:18,990,729-18,991,700 | + | C1H9g11670 | - | LOC_Os09g38834 | Os09g0561450 | - | Detail |
| C2H9g07673 | 9:18,994,638-18,997,547 | + | C1H9g10532 | CX9g057226 | LOC_Os09g38840 | Os09g0561500 | WAK90, OsWAK90 | Detail |
| C2H9g04667 | 9:18,998,302-19,001,481 | + | C1H9g28362 | CX9g057226 | LOC_Os09g38850 | Os09g0561600 | DEES1, WAK91, OsWAK91, OsDEES1 | Detail |
| C2H9g09243 | 9:19,011,775-19,015,596 | + | C1H9g04110 | - | LOC_Os09g38900 | Os09g0562400 | - | Detail |
| C2H9g11141 | 9:19,018,172-19,020,735 | + | C1H9g19363 | CX9g057226 | LOC_Os09g38910 | Os09g0562600 | WAK92, OsWAK92, OsDEES1-L4 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |