| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g25165 | 3:32,885,686-32,887,588 | - | C2H3g20263 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C1H3g04020 | 3:32,888,463-32,894,599 | - | C2H3g22865 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C1H3g13920 | 3:32,895,949-32,901,260 | - | C2H3g23885 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C1H3g00003 | 3:32,917,162-32,920,136 | + | C2H3g18445 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C1H3g05358 | 3:32,921,424-32,923,180 | - | C2H3g22112 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C1H3g18020 | 3:32,925,256-32,926,614 | - | C2H3g14550 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| C1H3g24850 | 3:32,928,738-32,932,739 | + | C2H3g06127 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C1H3g01007 | 3:32,933,006-32,935,436 | - | C2H3g01988 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C1H3g21046 | 3:32,935,712-32,937,240 | + | C2H3g11755 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C1H3g08743 | 3:32,937,686-32,943,657 | - | C2H3g01237 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C1H3g28947 | 3:32,944,618-32,952,053 | + | C2H3g27702 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C1H3g22971 | 3:32,953,532-32,957,757 | + | C2H3g20877 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C1H3g08128 | 3:32,958,528-32,959,671 | + | C2H3g21220 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C1H3g30449 | 3:32,960,840-32,964,567 | - | C2H3g22425 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C1H3g17557 | 3:32,964,924-32,966,813 | + | C2H3g21394 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C1H3g06046 | 3:32,967,135-32,970,461 | + | C2H3g07789 | CX3g027520 | LOC_Os03g62910 | Os03g0846400 | - | Detail |
| C1H3g24479 | 3:32,975,508-32,981,063 | - | C2H3g22805 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C1H3g13171 | 3:32,983,327-32,986,507 | + | C2H3g19054 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C1H3g03440 | 3:32,987,871-32,992,536 | + | C2H3g29284 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C1H3g17919 | 3:32,992,851-32,995,861 | - | C2H3g07021 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05915 | 7:19,414,116-19,416,555 | + | C1H7g08535 | CX7g049068 | LOC_Os07g39530 | Os07g0584200 | - | Detail |
| C2H7g08325 | 7:19,436,359-19,440,865 | + | C1H7g30537 | CX7g047975 | LOC_Os07g39560 | Os07g0584500 | - | Detail |
| C2H7g01401 | 7:19,447,972-19,450,928 | + | C1H7g23144 | CX7g047283 | LOC_Os07g39590 | Os07g0584900 | - | Detail |
| C2H7g01095 | 7:19,464,957-19,465,682 | - | - | - | - | - | - | Detail |
| C2H7g14449 | 7:19,466,988-19,469,370 | + | C1H7g20939 | CX7g048420 | LOC_Os07g39620 | Os07g0585000 | - | Detail |
| C2H7g18029 | 7:19,474,895-19,480,979 | + | C1H7g17896 | CX7g049289 | LOC_Os07g39630 | Os07g0585100 | OsMO25A, OsMO25A1 | Detail |
| C2H7g05447 | 7:19,481,937-19,482,911 | - | C1H7g10568 | CX7g048593 | LOC_Os07g39640 | Os07g0585200 | - | Detail |
| C2H7g25479 | 7:19,492,931-19,494,645 | + | C1H7g00944 | - | LOC_Os07g39680 | Os07g0585500 | OSPGYRP, OsPGYRP | Detail |
| C2H7g11944 | 7:19,495,495-19,502,747 | - | C1H7g09785 | CX7g050118 | LOC_Os07g39690 | Os07g0585600 | - | Detail |
| C2H7g28175 | 7:19,507,772-19,508,782 | + | C1H7g25396 | - | LOC_Os07g39700 | Os07g0585700 | SDR4, Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k | Detail |
| C2H7g05083 | 7:19,509,478-19,513,660 | - | C1H7g16934 | CX7g047965 | LOC_Os07g39710 | Os07g0585800 | - | Detail |
| C2H7g28026 | 7:19,518,471-19,522,057 | - | C1H7g26737 | CX7g049839 | LOC_Os07g39730 | Os07g0586000 | - | Detail |
| C2H7g03070 | 7:19,523,926-19,525,878 | - | C1H7g11177 | CX7g046857 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| C2H7g20298 | 7:19,527,188-19,531,034 | - | C1H7g31708 | CX7g050090 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| C2H7g01650 | 7:19,539,187-19,545,912 | + | C1H7g28144 | CX7g046227 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| C2H7g25217 | 7:19,548,054-19,551,239 | - | C1H7g03308 | CX7g049224 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| C2H7g30340 | 7:19,592,283-19,594,691 | + | C1H7g04106 | CX7g047969 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| C2H7g05226 | 7:19,595,556-19,598,379 | - | C1H7g17905 | CX7g049988 | - | - | - | Detail |
| C2H7g03999 | 7:19,601,342-19,604,412 | - | C1H7g10975 | CX7g047961 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| C2H7g16477 | 7:19,606,919-19,612,851 | - | C1H7g12981 | CX7g047553 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |